bioRxiv/medRxiv TRiP Review Activity

394 Reviews — GigaScience — All Subjects

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Meta-Research: Citation needed? Wikipedia and the COVID-19 pandemic
Benjakob, O., Aviram, R., Sobel, J. A.
10.1101/2021.03.01.433379 — Posted: 2021-03-01 — Discussion: 2022-02-02  GigaScience
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
Bayliss, S. C., Thorpe, H. A., Coyle, N. M., Sheppard, S. K., Feil, E. J.
10.1101/598391 — Posted: 2019-04-05 — Discussion: 2022-01-31  GigaScience
Housekeeping genes, revisited at the single-cell level
Lin, Y., Ghazanfar, S., Strbenac, D., Wang, A., Patrick, E., Speed, T., Yang, J., Yang, P.
10.1101/229815 — Posted: 2017-12-06 — Discussion: 2022-01-31  GigaScience
VAPPER: High-throughput Variant Antigen Profiling in African trypanosomes
Silva Pereira, S., Heap, J., Jones, A. R., Jackson, A. P.
10.1101/492074 — Posted: 2018-12-10 — Discussion: 2022-01-31  GigaScience
Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome
Song, B., Song, Y., Fu, Y., Kizito, E. B., Kabod, P. N., Liu, H., Kamenya, S. N., Muthemba, S., Kariba, R., Li, X., Wang, S., Cheng, S., Muchugi, A., Jamnadass, R., Shapiro, H.-Y., Deynze, A. V., Yang, H., Wang, J., Xu, X., Odeny, D. A., Liu, X.
10.1101/532077 — Posted: 2019-01-28 — Discussion: 2022-01-31  GigaScience
Refgenie: a reference genome resource manager
Stolarczyk, M., Reuter, V. P., Magee, N. E., Sheffield, N. C.
10.1101/698704 — Posted: 2019-07-12 — Discussion: 2022-01-31  GigaScience
rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data
Bushmanova, E., Antipov, D., Lapidus, A., Przhibelskiy, A. D.
10.1101/420208 — Posted: 2018-09-18 — Discussion: 2022-01-31  GigaScience
ascend: R package for analysis of single cell RNA-seq data
Senabouth, A., Lukowski, S., Alquicira, J., Andersen, S., Mei, X., Nguyen, Q., Powell, J.
10.1101/207704 — Posted: 2017-10-23 — Discussion: 2022-01-31  GigaScience
The intersectional genetics landscape for human
Macedo, A., Gontijo, A. M.
10.1101/552984 — Posted: 2019-02-18 — Discussion: 2022-01-31  GigaScience
Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large scale genetic studies
Atkinson, J. A., Lobet, G., Noll, M., Meyer, P. E., Griffiths, M., Wells, D. M.
10.1101/152702 — Posted: 2017-06-20 — Discussion: 2022-01-31  GigaScience

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