bioRxiv/medRxiv TRiP Review Activity

524 Reviews — All Partners — Bioinformatics

Most recent first Previous |  Page 19: Articles 181-190  | Next

Spotless: a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics
Sang-aram, C., Browaeys, R., Seurinck, R., Saeys, Y.
10.1101/2023.03.22.533802 — Posted: 2023-03-24 — Discussion: 2024-04-04  eLife
Genome-scale annotation of protein binding sites via language model and geometric deep learning
Yuan, Q., Tian, C., Yang, Y.
10.1101/2023.11.02.565344 — Posted: 2023-11-05 — Discussion: 2024-03-25  eLife
Molecular Property Diagnostic Suite for COVID-19 (MPDSCOVID-19): An open access disease specific drug discovery portal
Sastry, G. N., Priyadarsinee, L., Jamir, E., Nagamani, S., Mahanta, H. J., Kumar, N., John, L., Sarma, H., Kumar, A., Gaur, A. S., Sahoo, R., Vaikundamani, S., Murugan, N. A., Priyakumar, U. D., Raghava, G. P. S., Bharatam, P., Ramakrishnan, P., Subramanian, V., Sastry, G. M.
10.1101/2023.08.29.555437 — Posted: 2023-08-30 — Discussion: 2024-03-18  Gigabyte
Branching topology of the human embryo transcriptome revealed by entropy sort feature weighting
Radley, A., Smith, A.
10.1101/2023.10.12.562031 — Posted: 2023-10-16 — Discussion: 2024-03-18  Review Commons
Deep learning for rapid analysis of cell divisions in vivo during epithelial morphogenesis and repair
Turley, J. M., Chenchiah, I. V., Martin, P., Liverpool, T. B., Weavers, H.
10.1101/2023.03.20.533343 — Posted: 2023-03-23 — Discussion: 2024-03-12  eLife
Protein language model embedded geometric graphs power inter-protein contact prediction
Si, Y., Yan, C.
10.1101/2023.01.07.523121 — Posted: 2023-01-08 — Discussion: 2024-03-11  eLife
The probability of edge existence due to node degree: a baseline for network-based predictions
Zietz, M., Himmelstein, D. S., Kloster, K., Williams, C., Nagle, M. W., Greene, C. S.
10.1101/2023.01.05.522939 — Posted: 2023-01-06 — Discussion: 2024-03-04  GigaScience
A novel machine learning algorithm picks proteome signature to specifically identify cancer exosomes
Li, B., Kugeratski, F. G., Kalluri, R.
10.1101/2023.07.18.549557 — Posted: 2023-07-19 — Discussion: 2024-03-01  eLife
voyAGEr: free web interface for the analysis of age-related gene expression alterations in human tissues
Schneider, A. L., Saraiva-Agostinho, N., Barbosa-Morais, N. L.
10.1101/2022.12.22.521681 — Posted: 2022-12-23 — Discussion: 2024-02-29  eLife
BatchEval Pipeline: Batch Effect Evaluation Workflow for Multiple Datasets Joint Analysis
Zhang, C., Kang, Q., Li, M., Xie, H., Fang, S., Xu, X.
10.1101/2023.10.08.561465 — Posted: 2023-10-10 — Discussion: 2024-02-26  Gigabyte

Evaluation Sources