Channel:  4D Nucleome

476 Articles

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Chromatin accessibility dynamics of myogenesis at single cell resolution
Pliner, H., Packer, J., McFaline-Figueroa, J., Cusanovich, D., Daza, R., Srivatsan, S., Qiu, X., Jackson, D., Minkina, A., Adey, A., Steemers, F., Shendure, J., Trapnell, C.
10.1101/155473 — Posted: 2017-06-26
Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking
Kaewsapsak, P., Shechner, D. M., Mallard, W., Rinn, J. L., Ting, A. Y.
10.1101/153098 — Posted: 2017-06-21
Dense Bicoid Hubs Accentuate Binding along the Morphogen Gradient
Mir, M., Reimer, A., Haines, J. E., Li, X.-Y., Stadler, M., Garcia, H., Eisen, M. B., Darzacq, X.
10.1101/133124 — Posted: 2017-06-08
qSR: A software for quantitative analysis of single molecule and super-resolution data
Andrews, J. O., Narayanan, A., Spille, J.-H., Cho, W.-K., Thaler, J. D., Cisse, I. I.
10.1101/146241 — Posted: 2017-06-05
Reconstructing Spatial Transport Distributions In The Nuclear Pore Complex From 2D Images -- How Reliable Is It?
Tu, L.-C., Huisman, M., Chung, Y.-C., Smith, C., Grunwald, D.
10.1101/145110 — Posted: 2017-06-02
Specific Virus-Host Genome Interactions Revealed By Tethered Chromosome Conformation Capture
Li, H., Kalhor, R., Li, B., Su, T., Berk, A., Kurdistani, S., Alber, F., Chen, L.
10.1101/142604 — Posted: 2017-05-26
Static And Dynamic DNA Loops Form AP-1 Bound Activation Hubs During Macrophage Development
Phanstiel, D. H., Van Bortle, K., Spacek, D. V., Hess, G. T., Saad Shamim, M., Machol, I., Love, M. I., Lieberman Aiden, E., Bassik, M. C., Snyder, M. P.
10.1101/142026 — Posted: 2017-05-25
Cohesin Loss Eliminates All Loop Domains, Leading To Links Among Superenhancers And Downregulation Of Nearby Genes
Rao, S., Huang, S.-C., Glenn St. Hilaire, B., Engreitz, J. M., Perez, E. M., Kieffer-Kwon, K.-R., Sanborn, A. L., Johnstone, S. E., Bochkov, I. D., Huang, X., Shamim, M. S., Omer, A. D., Bernstein, B. E., Casellas, R., Lander, E. S., Lieberman Aiden, E.
10.1101/139782 — Posted: 2017-05-18
A Comparison Between Single Cell RNA Sequencing And Single Molecule RNA FISH For Rare Cell Analysis
Torre, E. A., Dueck, H., Shaffer, S., Gospocic, J., Gupte, R., Bonasio, R., Kim, J., Murray, J., Raj, A.
10.1101/138289 — Posted: 2017-05-18
Torque and buckling in stretched intertwined double-helix DNAs
Marko, J., Brahmachari, S.
10.1101/135905 — Posted: 2017-05-09

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