Channel:  4D Nucleome

476 Articles

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Simultaneous profiling of DNA methylation and chromatin architecture in mixed populations and in single cells
Li, G., Liu, Y., Zhang, Y., Fang, R., Kellis, M., Ren, B.
10.1101/470963 — Posted: 2018-11-15
Promoter-intrinsic and local chromatin features determine gene repression in lamina-associated domains
Leemans, C., van der Zwalm, M., Brueckner, L., Comoglio, F., van Schaik, T., Pagie, L., van Arensbergen, J., van Steensel, B.
10.1101/464081 — Posted: 2018-11-06
Satb1 integrates DNA sequence, shape, motif density and torsional stress to differentially bind targets in nucleosome-dense regions.
GHOSH, R. P., SHI, Q., YANG, L., REDDICK, M. P., NIKITINA, T., ZHURKIN, V. B., FORDYCE, P., STASEVICH, T. J., CHANG, H. Y., GREENLEAF, W. J., LIPHARDT, J. T.
10.1101/450262 — Posted: 2018-10-26
Highly Structured Homolog Pairing Reflects Functional Organization of the Drosophila Genome
AlHaj Abed, J., Erceg, J., Goloborodko, A., Nguyen, S. C., McCole, R. B., Saylor, W., Fudenberg, G., Lajoie, B. R., Dekker, J., Mirny, L. A., Wu, T.
10.1101/443887 — Posted: 2018-10-17
The genome-wide, multi-layered architecture of chromosome pairing in early Drosophila embryos
Erceg, J., AlHaj Abed, J., Goloborodko, A., Lajoie, B. R., Fudenberg, G., Abdennur, N., Imakaev, M., McCole, R. B., Nguyen, S. C., Saylor, W., Joyce, E. F., Senaratne, T. N., Hannan, M. A., Nir, G., Dekker, J., Mirny, L. A., Wu, C.-t.
10.1101/443028 — Posted: 2018-10-17
Antigen receptor locus dynamics is orchestrated near the sol-gel phase transition to enforce stepwise VDJ gene rearrangement
Khanna, N., Zhang, J., Dudko, O., Murre, C.
10.1101/441444 — Posted: 2018-10-12
Condensin II inactivation in interphase does not affect chromatin folding or gene expression
Abdennur, N., Schwarzer, W., Pekowska, A., Shaltiel, I. A., Huber, W., Haering, C. H., Mirny, L., Spitz, F.
10.1101/437459 — Posted: 2018-10-07
Physicochemical mechanotransduction alters nuclear shape and mechanics via heterochromatin formation
Stephens, A. D., Liu, P. Z., Kandula, V., Chen, H., Almassalha, L. M., Backman, V., O'Halloran, T., Adam, S. A., Goldman, R. D., Banigan, E. J., Marko, J. F.
10.1101/423442 — Posted: 2018-09-21
Twist-bend coupling and the statistical mechanics of DNA: perturbation theory and beyond
Nomidis, S. K., Skoruppa, E., Carlon, E., Marko, J. F.
10.1101/422683 — Posted: 2018-09-20
Spatial Chromatin Architecture Alteration by Structural Variations in Human Genomes at Population Scale
Sadowski, M., Kraft, A., Szalaj, P., Wlasnowolski, M., Tang, Z., Ruan, Y., Plewczynski, D.
10.1101/266981 — Posted: 2018-09-14

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