Channel:  Somatic Mosaicism across the Human Tissues Network (SMaHT)

22 Articles

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A telomere-to-telomere map of somatic mutation burden and functional impact in cancer
Sohn, M.-H., Dubocanin, D., Vollger, M. R., Kwon, Y., Minkina, A., Munson, K. M., Hart, S. F., Ranchalis, J. E., Parmalee, N. L., Sedeno-Cortes, A. E., Ou, J., Au, N. Y., Bohaczuk, S., Carroll, B., Frazar, C. D., Harvey, W. T., Hoekzema, K., Huang, M.-F., Jacques, C. N., Jensen, D. M., Kolar, J. T., Lee, R., Lin, J., Loy, K., Mack, T., Mao, Y., Pham, M. M., Ryke, E., Smith, J. D., Sutherlin, L., Swanson, E. G., Weiss, J. M., SMaHT Assembly Working Group, , Carvalho, C., Coorens, T. H., Harris, K., Wei, C.-L., Eichler, E. E., Altemose, N., Bennett, J. T., Stergachis, A. B.
10.1101/2025.10.10.681725 — Posted: 2025-10-13
A personalized multi-platform assessment of somatic mosaicism in the human frontal cortex
Zhou, W., Mumm, C., Gan, Y., Switzenberg, J. A., Wang, J., De Oliveira, P., Kathuria, K., Losh, S. J., Bessell, B., McDonald, T. L., McConnell, M. J., Boyle, A. P., Mills, R. E.
10.1101/2024.12.18.629274 — Posted: 2025-10-11
Comprehensive benchmarking of somatic mutation detection by the SMaHT Network
The Somatic Mosaicism across Human Tissues Network (SMaHT), , Abyzov, A.
10.1101/2025.10.09.678885 — Posted: 2025-10-10
Multi-platform framework for mapping somatic retrotransposition in human tissues
Wang, S., Bae, M., Wang, J., Zhao, B., Nguyen, K., Mallett, S., Switzenberg, J. A., Losh, S. J., Sexton, C. E., Miao, B., Dong, S., Zeng, X., Wang, Z., McDonald, T. L., Mumm, C., Gadde, R. K., Tariq, A. M., Chen, Z., Feng, W. C., Burn, A., Park, J., Chu, C., Shen, H., Wang, T., Urban, A. E., Zhu, X., Li, H., Burns, K. H., Chun, H.-J. E., Park, P. J., SMaHT MEI Working Group, , Boyle, A. P., Mills, R. E., Zhou, W., Lee, E. A.
10.1101/2025.10.07.680917 — Posted: 2025-10-07
Protamine lacunae preserve the paternal chromatin landscape in sperm
Tullius, T. W., Heuer, R. A., Bohaczuk, S. C., Mallory, B., Dubocanin, D., Ranchalis, J., Ayaz, A., Mason, C., Seli, E., Phillippy, A. M., Stergachis, A., Lesch, B. J.
10.1101/2025.10.03.680364 — Posted: 2025-10-05
A Pangenomic Method for Establishing a Somatic Variant Detection Resource in HapMap Mixtures
Kong, N., Tang, Z., Ruttenberg, A., Macias-Velasco, J. F., Li, Z., Zhang, W., Miao, B., Xin, Z., Fu, Q., Park, H., Zhuo, X., Mehinovic, E., Belter, E., Tomlinson, C., Garza, J. E., Dong, S., Casey, E., Johnson, B. K., Majewski, M. F., Palmer, T., Cheng, Y., Lindsay, T., Schedl, T., Li, D., Shen, H., Fulton, R., SMaHT Network Assembly/Pangenome Working Group, , Wang, T., Jin, S. C.
10.1101/2025.09.29.679336 — Posted: 2025-10-04
Comprehensive benchmarking of somatic structural variant detection at ultra-low allele fractions
Zhang, Y., English, A. C., Paulin, L. F., Grochowski, C. M., Maheshwari, S., Mack, T., Berselli, M., Veit, A. D., Fu, Y., SMAHT SV working group, , Park, P. J., Sedlazeck, F. J.
10.1101/2025.09.18.677206 — Posted: 2025-09-20
As48, a First-in-Class Dual-Function TREM2 Modulator: Receptor Activation and Shedding Inhibition
Cho, S., El gaamouch, F., Upadhyay, S., Nada, H., Kuncewicz, K., Gabr, M.
10.1101/2025.08.23.671919 — Posted: 2025-08-28
ToxiTaRGET: a multi-omics resource for toxicant-responsive molecular targets
Kumar, R., Fu, T., Kuntala, P. K., Fu, S., Li, D., Bartolomei, M. S., Walker, C. L., Wang, T., Zhang, B. A.
10.1101/2025.07.28.667228 — Posted: 2025-08-02
Image-based DNA Sequencing Encoding for Detecting Low-Mosaicism Somatic Mobile Element Insertions
Tan, M., Lin, Z., Chen, Z., Zhou, H., Park, J., He, Z., Lee, E. A., Gao, Z., Zhu, X.
10.1101/2024.11.07.619809 — Posted: 2025-05-16

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