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75 Articles

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A Multimodal Single-Cell Epigenomic and 3D Genome Atlas of the Human Basal Ganglia
Ding, W., Klein, A., Baez-Becerra, C. T., Rink, J. A., Bartlett, A., Zeng, Q., Wang, R., Castanon, R. G., Nery, J. R., Osgood, E., Owens, W., Petrella, A., Chen, C., Acerbo, A. S., Barcoma, A. S., Liu, J., Russo, K. G., Knutson, K. W., Young, C. K., Willier, J. K., Barragan, C., Arzavala, J., Cho, S., Altshul, J., Chan, D., Soma, E., Luo, J., Jain, M., Velazquez, S., Schenker-Ahmed, N., Sundaram, G. V., Manning, A. C., Sanchez, Y., Bikkina, A., Fu, S., OConnor, C., Liem, M., Marrin, M. V., Rose, C., Alt, S. N., Berry, J., Kern, C., Boone, E., Tian, W., Wu, Y., Hariharan, M., Fu, Y., Xie, Y., L
10.64898/2026.02.12.705594 — Posted: 2026-02-14
A consensus spinal cord cell type atlas across mouse, macaque, and human
Schmitz, M. T., Johansen, N. J., Kempynck, N., Kapen, I., Fu, Y., Hewitt, M., Seeman, S. C., Kussick, E., Gautier, O., Leone, M. J., Ding, S.-L., Gao, Y., Bhandiwad, A., Ariza, J., Ayala, A., Barta, S., Blum, J. A., Cano-Gomez, L., Cardenas, T., Chakka, A. B., Cuevas, N. V., Donadio, N., Fancher, K., Ferrer, R., Goldy, J., Hastings, S. D., Hirschstein, D., Ho, W., Huang, C., Juneau, Z. C., Kim, S. R., Lewis, Z. R., Liang, E., Martin, N. X., Nagra, J., Newman, D., Noh, M.-C., Olsen, P., Oyama, A., Pena, N., Poldsam, H., Ray, P. L., Reding, M., Rimorin, C., Ruiz, A., Shapovalova, N. V., Shulga
10.64898/2026.02.04.703852 — Posted: 2026-02-05
Single-cell Multiome Analysis of Chromatin State and Transcriptome in the Human Basal Ganglia
Chang, L., Li, K., Xie, Y., Zhong, G., Rink, J. A., Baez-Becerra, C. T., Lie, A., Indralingam, H. S., Dong, K., Loe, T., Wang, Z., Zu, S., Kern, J. C., Zhao, Z., Boone, E., Flores, J., Monell, A., Olness, J., Barragan, C., Osgood, E., Owens, W., Schenker-Ahmed, N., Zhang, W., Liu, D., Barcoma, A. S., Willier, J. K., Knutson, K. W., Russo, K. G., Liu, J., Cho, S., Arzavala, J., Young, C. K., Sundaram, G. V., Manning, A. C., Sanchez, Y., Bikkina, A., Berry, J., Gao, X., OConnor, C., Liem, M., Marrin, M. V., Rose, C., Alt, S. N., Zhu, C., Zemke, N. R., Ding, W., Klein, A., Fu, Y., Johansen, N., B
10.64898/2026.02.03.703645 — Posted: 2026-02-04
Single-Cell Atlas of Transcription and Chromatin States Reveals Regulatory Programs in the Human Brain
Xie, Y., Chang, L., Zhong, G., Rink, J. A., Baez-Becerra, T., Armand, E., Ding, W., Li, K., Boone, E., Lie, A., Indralingam, H. S., Dong, K., Loe, T., Huang, B., Wang, Z., Barcoma, A. S., Willier, J. K., Knutson, K. W., Liu, J., Cho, S., Cao, S., Russo, K. G., Young, C. K., Arzavala, J., Sanchez, Y., Bikkina, A., Schenker-Ahmed, N., Kern, C., Zhao, Z., Klein, A., Flores, J., Tai, C.-Y., Olness, J., Monell, A., Moghadami, S., Barragan, C., Chen, C., Owens, W., OConnor, C., Liem, M., Marrin, M. V., Rose, C., Alt, S. N., Emerson, N., Osteen, J., Lucero, J., Li, D., Hodge, R. D., Wang, T., Keene
10.64898/2026.02.02.703166 — Posted: 2026-02-03
An Integrated Single-Cell and Epigenomic Resource for Comparative Analysis of the Basal Ganglia
Zhang, W., Ding, W., Li, K., Chang, L., Klein, A., Baez-Becerra, C. T., Rink, J. A., Bartlett, A., Chen, H., Schenker, N., Johansen, N., Mollenkopf, T., Fu, Y., Yang, X., Liu, S., Seng, C., Miao, B., Liu, T., Zhu, Q., Hodge, R. D., Bakken, T. E., Lein, E. S., Hawrylycz, M., Xu, X., Behrens, M. M., Ren, B., Ecker, J. R., Wang, T., Li, D.
10.64898/2026.01.29.702575 — Posted: 2026-02-02
A Single-Cell and Spatial 3D Multi-omic Atlas of Developing Human Basal Ganglia and Inhibitory Neurons
Heffel, M. G., Xu, H., Pastor-Alonso, O., Li, X., Baig, M. S., Irfan Ghoor, R., Li, R., Kern, C., Kum, J., Zhang, Y., Paino, J., Tsai, M. J., Tai, C.-Y., Tucker, G., Zhao, Z., Hou, A., von Behren, Z., Bhade, M., Li, S., Sandoval, K., Scholes, J., Codrea, F., Calimlim, J., Liao, E. K., Leung, G., Kim, J., Eskin, E., Flint, J., Cotter, J. A., Pasaniuc, B., Bintu, B., Zhu, Q., Mukamel, E. A., Ernst, J., Paredes, M. F., Luo, C.
10.64898/2026.01.28.702385 — Posted: 2026-01-29
Human Neocortical Glutamatergic Neurons Revealed Through Multimodal Profiling
Dalley, R., Walling-Bell, S., Miller, J. A., Waleboer, F., Thijssen, J., McCutcheon, A., Gelfand, E., Mallory, M., Radaelli, C., Liu, X.-P., Sawchuk, S., Alfiler, L., Andrade, J., Ariza, J., Ayala, A., Baker, K., Barkan, E., Barta, S., Berry, K., Bertagnolli, D., Bickley, K., Bixby, M., Blake, K., Bomben, J., Brouner, K., Budzillo, A., Campos, J., Cardenas, T., Carey, D., Casper, T., Chakka, A. B., Clark, M., Coopmans, T. V., Crichton, K., Dee, N., Dotson, N. I., Driessens, S. L. W., Egdorf, T., Ellingwood, L., English, C., Enstrom, R., de Frates, R., Galakhova, A. A., Gary, A., Gloe, J., Gold
10.64898/2026.01.08.698257 — Posted: 2026-01-16
The Caudate Nucleus Exhibits Distinct Pathology and Cell Type-Specific Responses Across Alzheimer's Disease
Kana, O. Z., Postupna, N., Agrawal, A., Long, B., Travaglini, K., Gabitto, M., Lai, H.-Y., Mahoney, J. T., Xiao, M., Bajwa, T., Hulsey-Vincent, H., Oyaizu, S. L., Mena, G. E., Hong, J., Gelfand, E. C., Kaplan, E. S., Ariza, J., Smith, K. A., McMillen, D. A., Hastings, S. D., Chakka, A. B., Goldy, J., Melief, E. J., Juneau, Z., Barta, S., Oyama, A., Ruiz, A., Pom, C. A., Ayala, A., Bixby, M., Huang, A., Martin, N., Cuevas, N. V., Olsen, P., Nagra, J., Chakrabarty, R., Tieu, M., Cardenas, T., Torkelson, A., Bertagnolli, D., Guzman, J., Ferrer, R., Waters, J., Grabowski, T. J., Crane, P. K., Gatt
10.64898/2026.01.10.694705 — Posted: 2026-01-15
Progenitor Diversity and Architecture of the Human Ganglionic Eminences Shaping the Basal Ganglia
Siebert, C. V., Song, M., Moriano, J. A., Li, Z., Silla, A. C., Walker, M., Chen, S., Baltazar, J., Oliveira, L. G. d., Shankar, M., Xie, Y., Suraparaju, P., Wang, S., Bi, Q., Xie, Y., Ren, Y., Garcia, M. T., Wang, L., Zuo, G., Smidt, M. P., Hoekman, M. F. M., Harwell, C., Parent, J., Rubenstein, J., Alvarez-Buylla, A., Kriegstein, A.
10.64898/2025.12.31.697063 — Posted: 2026-01-02
UC Irvine Brain Initiative Cell Atlas Network (BICAN) Brain Procurement Program for the Center for Multiomic Human Brain Cell Atlas Project
Xu, X., Berry, J. V., Tran, B. M., Wu, G., Tan, Z., Mendoza, E., Kim, M., Arat, Z., Lin, P. S. H., Valenzuela, L., Holmes, T. C., Virovka, A., Thaxton, M., Nguyen, M., Stein, S., Sigaroudi, V. R., De La Rosa, A., Gawronski, B., Silva, J., Gonzalez, L., Wright, S., Wood, K., Hui, G. K., Anousaya, D., Gangeddula, V. R., Gama, N., Gama, J., Gross, T., Bunney, B., Stein, R., Sequeira, P. A., Mamdani, F., Cartagena, P., Bunney, W. E., Lou, J., Park, H. L., Wilson, A., Brooks, H. M., Allhusen, V., Crawford, J., Knight, J. M., Ren, B., Ecker, J., Behrens, M. M., Keene, C. D., Stark, C., Head, E., Yon
10.64898/2025.12.23.696304 — Posted: 2025-12-26

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