Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

184 Articles

A human prenatal skin cell atlas reveals immune cell regulation of skin morphogenesis
Gopee, N. H., Huang, N., Olabi, B., Admane, C., Botting, R. A., Foster, A. R., Torabi, F., Winheim, E., Sumanaweera, D. N., Goh, I., Miah, M., Stephenson, E., Tun, W. M., Moghimi, P., Rumney, B., He, P., Lawrence, S., Roberts, K., Sidhpura, K., Englebert, J., Jardine, L., Reynolds, G., Rose, A., Ganier, C., Rowe, V., Pritchard, S., Mulas, I., Fletcher, J., Popescu, D.-M., Poyner, E. F., Dubois, A., Filby, A., Lisgo, S., Barker, R. A., PARK, J.-E., Vento-Tormo, R., Le, P. A., Serdy, S., Kim, J., Deakin, C., Lee, J., Nikolova, M. T., Rajan, N., Ballereau, S., Li, T., Moore, J., Horsfall, D., Bas
10.1101/2023.10.12.556307 — Posted: 2023-10-12
Scaling cross-tissue single-cell annotation models
Fischer, F., Fischer, D. S., Biederstedt, E., Villani, A.-C., Theis, F. J.
10.1101/2023.10.07.561331 — Posted: 2023-10-10
Quantifying Adaptive Evolution of the Human Immune Cell Landscape
Salvador-Martinez, I., Murga-Moreno, J., Nieto, J. C., Alsinet, C., Enard, D., Heyn, H.
10.1101/2023.10.06.559946 — Posted: 2023-10-06
An integrated transcriptomic cell atlas of human neural organoids
He, Z., Dony, L., Fleck, J. S., Szalata, A., Li, K. X., Sliskovic, I., Lin, H.-C., Santel, M., Atamian, A., Quadrato, G., Sun, J., Pasca, S. P., Camp, G., Theis, F., Treutlein, B.
10.1101/2023.10.05.561097 — Posted: 2023-10-06
Single nuclei chromatin accessibility and transcriptomic map of breast tissues of women of diverse genetic ancestry
Bhat-Nakshatri, P., Gao, H., Khatpe, A. S., McGuire, P. C., Erdogan, C., Chen, D., Jiang, G., New, F., German, R., Storniolo, A. M., Liu, Y., Nakshatri, H.
10.1101/2023.10.04.560911 — Posted: 2023-10-06
Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
Jin, K., Zhang, Z., Zhang, K., Viggiani, F., Callahan, C., Tang, J., Aronow, B. J., Shu, J.
10.1101/2023.09.19.558548 — Posted: 2023-09-22
Single-cell analysis of prenatal and postnatal human cortical development
Velmeshev, D., Perez, Y., Yan, Z., Valencia, J. E., Castaneda-Castellanos, D. R., Wang, L., Schirmer, L., Mayer, S., Wick, B., Wang, S., Nowakowski, T. J., Paredes, M., Huang, E. J. J., Kriegstein, A.
10.1101/2022.10.24.513555 — Posted: 2023-09-14
Human subcutaneous and visceral adipocyte atlases uncover classical and specialized adipocytes and depot-specific patterns
Lazarescu, O., Ziv Agam, M., Haim, Y., Hekselman, I., Jubran, J., Shneyour, A., Kitsberg, D., Levin, L., Liberty, I. F., Yoel, U., Dukhno, O., Adam, M., Korner, A., Murphy, R., Bluher, M., Habib, N., Rudich, A., Yeger-Lotem, E.
10.1101/2023.09.04.555678 — Posted: 2023-09-04
Scalable querying of human cell atlases via a foundational model reveals commonalities across fibrosis-associated macrophages
Heimberg, G., Kuo, T. C., DePianto, D., Heigl, T., Diamant, N., Salem, O., Scalia, G., Biancalani, T., Rock, J., Turley, S., Corrada Bravo, H., Kaminker, J., Vander Heiden, J. A., Regev, A.
10.1101/2023.07.18.549537 — Posted: 2023-08-26
Spatial landmark detection and tissue registration with deep learning
Ekvall, M. N., Bergenstrahle, L., Andersson, A., Olegard, J., Czarnewski, P., Kall, L., Lundeberg, J.
10.1101/2023.08.24.554614 — Posted: 2023-08-26

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