Channel:  Human Cell Atlas

198 Articles

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Bering: joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
Jin, K., Zhang, Z., Zhang, K., Viggiani, F., Callahan, C., Tang, J., Aronow, B. J., Shu, J.
10.1101/2023.09.19.558548 — Posted: 2023-09-22
Human HYPOMAP: A comprehensive spatio-cellular map of the human hypothalamus
Tadross, J. A., Steuernagal, L., Dowsett, G., Kentistou, K. A., Lundh, S., Porniece, M., Klemm, P., Rainbow, K., Hvid, H., Kania, K., Polex-Wolf, J., Knudsen, L. B., Pyke, C., Perry, J., Lam, B. Y., Bruening, J. C., Yeo, G. S. H.
10.1101/2023.09.15.557967 — Posted: 2023-09-15
Single-cell analysis of prenatal and postnatal human cortical development
Velmeshev, D., Perez, Y., Yan, Z., Valencia, J. E., Castaneda-Castellanos, D. R., Wang, L., Schirmer, L., Mayer, S., Wick, B., Wang, S., Nowakowski, T. J., Paredes, M., Huang, E. J. J., Kriegstein, A.
10.1101/2022.10.24.513555 — Posted: 2023-09-14
Human subcutaneous and visceral adipocyte atlases uncover classical and specialized adipocytes and depot-specific patterns
Lazarescu, O., Ziv Agam, M., Haim, Y., Hekselman, I., Jubran, J., Shneyour, A., Kitsberg, D., Levin, L., Liberty, I. F., Yoel, U., Dukhno, O., Adam, M., Korner, A., Murphy, R., Bluher, M., Habib, N., Rudich, A., Yeger-Lotem, E.
10.1101/2023.09.04.555678 — Posted: 2023-09-04
Spatial landmark detection and tissue registration with deep learning
Ekvall, M. N., Bergenstrahle, L., Andersson, A., Olegard, J., Czarnewski, P., Kall, L., Lundeberg, J.
10.1101/2023.08.24.554614 — Posted: 2023-08-26
Scalable querying of human cell atlases via a foundational model reveals commonalities across fibrosis-associated macrophages
Heimberg, G., Kuo, T. C., DePianto, D., Heigl, T., Diamant, N., Salem, O., Scalia, G., Biancalani, T., Rock, J., Turley, S., Corrada Bravo, H., Kaminker, J., Vander Heiden, J. A., Regev, A.
10.1101/2023.07.18.549537 — Posted: 2023-08-26
Polybacterial intracellular coinfection of epithelial stem cells in periodontitis
Easter, Q. T., Matuck, B. F., Stark, G. B., Worth, C. L., Predeus, A. V., Fremin, B., Huynh, K. T., Ranganathan, V., Pereira, D., Weaver, T., Miller, K., Perez, P., Hasuike, A., Chen, Z., Bush, M., Qu, X., Warner, B. M., Lee, J., Wallet, S. M., Sequeira, I., Tyc, K. M., Liu, J., Ko, K. I., Teichmann, S. A., Byrd, K. M.
10.1101/2023.08.23.554343 — Posted: 2023-08-24
multiDGD: A versatile deep generative model for multi-omics data
Schuster, V., Dann, E., Krogh, A., Teichmann, S.
10.1101/2023.08.23.554420 — Posted: 2023-08-23
Spatiotemporal molecular dynamics of the developing human thalamus
Kim, C., Shin, D., Wang, A., Nowakowski, T.
10.1101/2023.08.21.554174 — Posted: 2023-08-22
Consensus prediction of cell type labels with popV
Ergen, C., Xing, G., Xu, C., Jayasuriya, M., McGeever, E., Pisco, A. O., Streets, A. M., Yosef, N.
10.1101/2023.08.18.553912 — Posted: 2023-08-21

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