Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

184 Articles

Integrated multi-omics single cell atlas of the human retina
Li, J., Wang, J., Ibarra, I. L., Cheng, X., Luecken, M. D., Lu, J., Monavarfeshani, A., Yan, W., Zheng, Y., Zuo, Z., Colborn, S. L. Z., Cortez, B. S., Owen, L. A., Tran, N. M., Shekhar, K., Sanes, J. R., Stout, J. T., Chen, S., Li, Y., DeAngelis, M. M., Theis, F. J., Chen, R.
10.1101/2023.11.07.566105 — Posted: 2023-11-08
Spatial protein and RNA analysis on the same tissue section using MICS technology
Neil, E., Park, D., Hennessey, R. C., DiBiasio, E. C., DiBuono, M., Lafayette, H., Lloyd, E., Lo, H., Femel, J., Makrigiorgos, A., Soliman, S., Mangiardi, D., Praveen, P., Rüberg, S., Staubach, F., Hindman, R., Rothmann, T., Meyer, H., Wantenaar, T., Wang, J., Müller, W., Pinard, R., Bosio, A.
10.1101/2023.10.27.564191 — Posted: 2023-11-07
Cutaneous T cell lymphoma atlas reveals malignant Th2 cells supported by a B cell-rich microenvironment
Li, R., Strobl, J., Poyner, E. F. M., Torabi, F., Mazin, P., Chipampe, N.-J., Stephenson, E., Gardner, L., Olabi, B., Coulthard, R., Botting, R. A., Zila, N., Prigmore, E., Gopee, N., Engelbert, J., Goh, I., Chan, H. M., Johnson, H., Ellis, J., Rowe, V., Tun, W., Reynolds, G., Foster, A. R., Gambardella, L., Winheim, E., Admane, C., Rumney, B., Steele, L., Jardine, L., Nenonen, J., Pickard, K., Lumley, J., Hampton, P., Hu, S., Liu, F., Liu, X., Horsfall, D., Basurto-Lozada, D., Grimble, L., Bacon, C. M., Weatherhead, S., Brauner, H., Wang, Y., Bai, F., Reynolds, N. J., Allen, J. E., Jonak, C.
10.1101/2023.11.06.565474 — Posted: 2023-11-07
An integrated single-cell reference atlas of the human endometrium
Mareckova, M., Garcia-Alonso, L., Moullet, M., Lorenzi, V., Petryszak, R., Sancho-Serra, C., Oszlanczi, A., Icoresi Mazzeo, C., Hoffman, S., Krassowski, M., Garbutt, K., Kelava, I., Gaitskell, K., Yancheva, S., Von Woon, E., Male, V., Granne, I., Hellner, K., Mahbubani, K. T., Saeb-Parsy, K., Lotfollahi, M., Prigmore, E., Southcombe, J., Dragovic, R. A., Becker, C. M., Zondervan, K. T., Vento-Tormo, R.
10.1101/2023.11.03.564728 — Posted: 2023-11-05
Oncogenic RAS-Pathway Activation Drives Oncofetal Reprogramming and Creates Therapeutic Vulnerabilities in Juvenile Myelomonocytic Leukemia
Hartmann, M., Schoenung, M., Rajak, J., Maurer, V., Hai, L., Bauer, K., Hakobyan, M., Staeble, S., Langstein, J., Jardine, L., Roelz, R., Bohler, S., Khabirova, E., Maag, A.-H., Vonficht, D., Lebrecht, D., Bernt, K. M., Tan, K., Chen, C., Alikarami, F., Boch, T., Flore, V., Lutsik, P., Milsom, M. D., Raffel, S., Buske, C., Haas, S., Haniffa, M., Mallm, J.-P., Behjati, S., Bonder, M.-J., Froehling, S., Niemeyer, C. M., Hey, J., Flotho, C., Plass, C., Erlacher, M., Schlesner, M., Lipka, D. B.
10.1101/2023.10.27.563754 — Posted: 2023-11-01
Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity.
Quach, H. T., Farrell, S., Kanagarajah, K., Wu, M., Xu, X., Kallurkar, P., Turinsky, A., Bear, C., Ratjen, F., Goyal, S., Moraes, T. J., Wong, A.
10.1101/2023.10.27.564403 — Posted: 2023-10-31
Pan-cancer profiling of tumor-infiltrating natural killer cells through transcriptional reference mapping
Netskar, H. K., Pfefferle, A., Goodridge, J. P., Sohlberg, E., Dufva, O., Teichmann, S., Clancy, T., horowitz, a., Malmberg, K.-J.
10.1101/2023.10.26.564050 — Posted: 2023-10-30
A spatial human thymus cell atlas mapped to a continuous tissue axis
Yayon, N., Kedlian, V. R., Boehme, L., Suo, C., Wachter, B., Beuschel, R. T., Amsalem, O., Polanski, K., Koplev, S., Tuck, E., Dann, E., Van Hulle, J., Perera, S., Putteman, T., Predeus, A. V., Dabrowska, M., Richardson, L., Tudor, C., Kreins, A. Y., Engelbert, J., Stephenson, E., Kleshchevnikov, V., De Rita, F., Crossland, D., Bosticardo, M., Pala, F., Prigmore, E., Chipampe, N.-J., Prete, M., Fei, L., To, K., Barker, R. A., He, X., Van Nieuwerburgh, F., Bayraktar, O., Patel, M., Davies, G. E., Haniffa, M. A., Uhlmann, V., Notarangelo, L. D., Germain, R. N., Radtke, A. J., Marioni, J. C., Tag
10.1101/2023.10.25.562925 — Posted: 2023-10-28
Gene-level alignment of single cell trajectories
Sumanaweera, D., Suo, C., Cujba, A.-M., Muraro, D., Dann, E., Polanski, K., Steemers, A. S., Lee, W., Oliver, A. J., Park, J.-E., Meyer, K. B., Dumitrascu, B., Teichmann, S. A.
10.1101/2023.03.08.531713 — Posted: 2023-10-18
Automatic cell type harmonization and integration across Human Cell Atlas datasets
Xu, C., Prete, M., Webb, S., Jardine, L., Stewart, B., Hoo, R., He, P., Meyer, K. B., Teichmann, S.
10.1101/2023.05.01.538994 — Posted: 2023-10-17

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