Channel:  Human Cell Atlas

185 Articles

Harnessing Agent-Based Modeling in CellAgentChat to Unravel Cell-Cell Interactions from Single-Cell Data
Raghavan, V., Li, Y., Ding, J.
10.1101/2023.08.23.554489 — Posted: 2024-03-25
Cellular heterogeneity and dynamics of the human uterus in healthy premenopausal women
Ulrich, N. D., Vargo, A. H., Ma, Q., Shen, Y.-C., Hannum, D. F., Gurczynski, S. J., Moore, B. B., Schon, S., Lieberman, R., Shikanov, A., Marsh, E. E., Fazleabas, A. T., Li, J. Z., Hammoud, S. S.
10.1101/2024.03.07.583985 — Posted: 2024-03-12
Spatial transcriptomics of healthy and fibrotic human liver at single-cell resolution
Watson, B., Paul, B., Amir-Zilberstein, L., Segerstolpe, A., Rahman, R., Shih, A., Deguine, J., Xavier, R., Moffitt, J. R., Mullen, A. C.
10.1101/2024.02.02.578633 — Posted: 2024-02-07
SuperCellCyto: enabling efficient analysis of large scale cytometry datasets
Putri, G. H., Howitt, G., Marsh-Wakefield, F., Ashhurst, T. M., Phipson, B.
10.1101/2023.08.14.553168 — Posted: 2024-01-30
Integrated platform for multi-scale molecular imaging and phenotyping of the human brain
Park, J., Wang, J., Guan, W., Gjesteby, L. A., Pollack, D., Kamentsky, L., Evans, N. B., Stirman, J., Gu, X., Zhao, C., Marx, S., Kim, M. E., Choi, S. W., Snyder, M., Chavez, D., Su-Arcaro, C., Tian, Y., Park, C. S., Zhang, Q., Yun, D. H., Moukheiber, M., Feng, G., Yang, X. W., Keene, C. D., Hof, P. R., Ghosh, S. S., Frosh, M. P., Brattain, L. J., Chung, K.
10.1101/2022.03.13.484171 — Posted: 2024-01-16
Spatially resolved single-cell atlas of the lung in fatal Covid19 in an African population reveals a distinct cellular signature and an interferon gamma dominated response
Nyirenda, J., Hardy, O., Silva Filho, J. L., Herder, V., Attipa, C., Ndovi, C., Siwombo, M., Namalima, T., Suwedi, L., Nyasulu, W., Ngulube, T., Nyirenda, D., Mvaya, L., Phiri, J., Chasweka, D., Eneya, C., Makwinja, C., Phiri, C., Ziwoya, F., Tembo, A., Makwangwala, K., Khoswe, S., Banda, P., Morton, B., Hilton, O., Lawrence, S., Frere dos Reis, M., Cardoso Melo, G., Vinicious Guimaros de Lecerda, M., Trindande Maranhao Costa, F., Marcelo Monteiro, W., Carlos de Lima Fereirra, L., Johnson, C., Mcguinness, D., Jambo, K., Haley, M. J., Kumwenda, B., Palmarini, M., Barnes, K. G., Denno, D. M., Vo
10.1101/2023.11.16.566964 — Posted: 2023-12-12
uniLIVER: a Human Liver Cell Atlas for Data-Driven Cellular State Mapping
Wu, Y., Fan, Y., Miao, Y., Li, Y., Chen, Z., Du, G., Diao, J., Chen, Y.-A., Ye, M., You, R., Chen, A., Chen, Y., Li, W., Guo, W., Dong, J., Zhang, X., Wang, Y., Gu, J.
10.1101/2023.12.09.570903 — Posted: 2023-12-09
An integrated transcriptomic cell atlas of human endoderm-derived organoids
Xu, Q., Halle, L., Hediyeh-zadeh, S., Kuijs, M., Kilik, U., Yu, Q., Frum, T., Adam, L., Parikh, S., Gander, M., Kfuri-Rubens, R., Klein, D., He, Z., Fleck, J. S., Oost, K., Kahnwald, M., Barbiero, S., Mitrofanova, O., Maciag, G., Jensen, K. B., Lutolf, M., Liberali, P., Beumer, J., Spence, J. R., Treutlein, B., Theis, F. J., Camp, J. G.
10.1101/2023.11.20.567825 — Posted: 2023-12-04
A deep lung cell atlas reveals cytokine-mediated lineage switching of a rare cell progenitor of the human airway epithelium
Waghray, A., Monga, I., Lin, B., Shah, V., Slyper, M., Giotti, B., Xu, J., Waldman, J., Dionne, D., Nguyen, L. T., Lou, W., Cai, P., Park, E., Muus, C., Sun, J., Surve, M. V., Yang, L. C. C., Rozenblatt-Rosen, O., Dolerey, T. M., Saladi, S. V., Tsankov, A. M., Regev, A., Rajagopal, J.
10.1101/2023.11.28.569028 — Posted: 2023-11-29
Cell type-specific effects of age and sex on human cortical neurons
Chien, J.-F., Liu, H., Wang, B.-A., Luo, C., Bartlett, A., Castanon, R., Johnson, N. D., Nery, J. R., Osteen, J., Li, J., Altshul, J., Kenworthy, M., Valadon, C., Liem, M., Claffey, N., O'Connor, C., Seeker, L. A., Ecker, J. R., Behrens, M. M., Mukamel, E. A.
10.1101/2023.11.11.566717 — Posted: 2023-11-15

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