bioRxiv/medRxiv TRiP Review Activity

506 Reviews — All Partners — Bioinformatics

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A universal, open-source, high-performance tool for automated sleep staging
Vallat, R., Walker, M. P.
10.1101/2021.05.28.446165 — Posted: 2021-05-28 — Discussion: 2021-08-20  eLife
Mantis: flexible and consensus-driven genome annotation
Queiros, P., Delogu, F., Hickl, O., May, P., Wilmes, P.
10.1101/2020.11.02.360933 — Posted: 2020-11-03 — Discussion: 2021-08-17  GigaScience
StoatyDive: Evaluation and Classification of Peak Profiles for Sequencing Data
Heyl, F., Backofen, R.
10.1101/799114 — Posted: 2019-10-09 — Discussion: 2021-08-15  GigaScience
PARROT: a flexible recurrent neural network framework for analysis of large protein datasets
Griffith, D., Holehouse, A. S.
10.1101/2021.05.21.445045 — Posted: 2021-05-23 — Discussion: 2021-08-06  eLife
SCRaPL: hierarchical Bayesian modelling of associations in single cell multi-omics data
Maniatis, C., Vallejos, C. A., Sanguinetti, G.
10.1101/2021.05.13.443959 — Posted: 2021-05-14 — Discussion: 2021-07-27  Review Commons
A Linear-Time Solution to the Labeled Robinson-Foulds Distance Problem
Briand, S., Dessimoz, C., El-Mabrouk, N., Nevers, Y.
10.1101/2020.09.14.293522 — Posted: 2020-09-15 — Discussion: 2021-07-23  Peer Community In
Expanding the MECP2 network using comparative genomics reveals potential therapeutic targets for Rett syndrome
Unterman, I., Bloch, I., Cazacu, S., Kazimirsky, G., Berman, B. P., Ben-Zeev, B., Brodie, C., Tabach, Y.
10.1101/2021.02.14.431162 — Posted: 2021-02-15 — Discussion: 2021-07-21  eLife
TransPi - a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
Rivera-Vicens, R. E., Garcia Escudero, C., Conci, N., Eitel, M., Wörheide, G.
10.1101/2021.02.18.431773 — Posted: 2021-02-18 — Discussion: 2021-07-19  Peer Community In
Pipeline to detect the relationship between transposable elements and adjacent genes in host genome
Meguerditchian, C., Ergun, A., DECROOCQ, V., LEFEBVRE, M., Bui, Q. T.
10.1101/2021.02.25.432867 — Posted: 2021-02-26 — Discussion: 2021-07-06  Peer Community In
On the Relation of Gene Essentiality to Intron Structure: A Computational and Deep Learning Approach
Schonfeld, E., Vendrow, E., Vendrow, J., Schonfeld, E.
10.1101/2020.03.31.019125 — Posted: 2020-04-01 — Discussion: 2021-05-19  EMBO Press

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