bioRxiv/medRxiv TRiP Review Activity

478 Reviews — All Partners — Bioinformatics

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Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses
dugourd, A., Kuppe, C., Sciacovelli, M., Gjerga, E., Emdal, K. B., Bekker-Jensen, D. B., Kranz, J., Bindels, E. J. M., Costa, S., Olsen, J. V., Frezza, C., Kramann, R., Saez-Rodriguez, J.
10.1101/2020.04.23.057893 — Posted: 2020-04-25 — Discussion: 2021-02-25  EMBO Press
Competitive binding of STATs to receptor phospho-Tyr motifs accounts for altered cytokine responses in autoimmune disorders
Wilmes, S., Jeffrey, P.-A., Martinez-Fabregas, J., Hafer, M., Fyfe, P. K., Pohler, E., Gaggero, S., Lythe, G., Launay, D., Mitra, S., Piehler, J., Molina-Paris, C., Moraga Gonzalez, I.
10.1101/2021.01.08.425379 — Posted: 2021-01-09 — Discussion: 2021-02-09  eLife
Artistoo: build, share, and explore simulations of cells and tissues in the web browser
Wortel, I. M. N., Textor, J.
10.1101/2020.05.01.072975 — Posted: 2020-05-03 — Discussion: 2021-01-20  eLife
Generating functional protein variants with variational autoencoders
Hawkins-Hooker, A., Depardieu, F., Baur, S., Couairon, G., Chen, A., Bikard, D.
10.1101/2020.04.07.029264 — Posted: 2020-04-07 — Discussion: 2020-11-30  Review Commons
Bayesian Hidden Markov modeling and model selection by Kalman filtering applied to multi-dimensional data of ion channels
Muench, J. L., Paul, F., Schmauder, R., Benndorf, K.
10.1101/2020.04.27.029207 — Posted: 2020-04-28 — Discussion: 2020-11-23  eLife
Predicting cell health phenotypes using image-based morphology profiling
Gregory P. Way, Maria Kost-Alimova, Tsukasa Shibue, William F. Harrington, Stanley Gill, Federica Piccioni, Tim Becker, William C. Hahn, Anne E. Carpenter, Francisca Vazquez, Shantanu Singh
10.1101/2020.07.08.193938 — Posted: 2020-07-10 — Discussion: 2020-11-09  Review Commons
Automated Edge-Aware Refinement of Anatomical Atlases in 3D and Its Application to the Developing Mouse Brain
Young, D. M., Fazel Darbandi, S., Schwartz, G., Bonzell, Z., Yuruk, D., Nojima, M., Gole, L., Rubenstein, J. L., Yu, W., Sanders, S. J.
10.1101/2020.04.01.017665 — Posted: 2020-04-02 — Discussion: 2020-10-26  eLife
Confronting p-hacking: addressing p-value dependence on sample size
Gomez de Mariscal, E., Sneider, A., Jayatilaka, H., Phillip, J. M., Wirtz, D., Munoz-Barrutia, A.
10.1101/2019.12.17.878405 — Posted: 2019-12-17 — Discussion: 2020-10-23  eLife
Predicting antigen-specificity of single T-cells based on TCR CDR3 regions
Fischer, D. S., Wu, Y., Schubert, B., Theis, F. J.
10.1101/734053 — Posted: 2019-08-14 — Discussion: 2020-10-06  EMBO Press
Predicting gene regulatory networks from cell atlases
Moller, A. F., Natarajan, K. N.
10.1101/2020.08.21.261735 — Posted: 2020-08-24 — Discussion: 2020-10-06  EMBO Press

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