bioRxiv/medRxiv TRiP Review Activity

442 Reviews — GigaScience — All Subjects

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Piggy: A Rapid, Large-Scale Pan-Genome Analysis Tool for Intergenic Regions in Bacteria
Thorpe, H. A., Bayliss, S. C., Sheppard, S. K., Feil, E. J.
10.1101/179515 — Posted: 2017-08-22 — Discussion: 2022-01-22  GigaScience
Reproducible genomics analysis pipelines with GNU Guix
Wurmus, R., Uyar, B., Osberg, B., Franke, V., Gosdschan, A., Wreczycka, K., Ronen, J., Akalin, A.
10.1101/298653 — Posted: 2018-04-11 — Discussion: 2022-01-22  GigaScience
YAMP: a framework enabling reproducibility in metagenomics research
Visconti, A., Martin, T. C., Falchi, M.
10.1101/223016 — Posted: 2017-11-21 — Discussion: 2022-01-22  GigaScience
Arabidopsis phenotyping through Geometric Morphometrics
Manacorda, C. A., Asurmendi, S.
10.1101/194449 — Posted: 2017-09-27 — Discussion: 2022-01-22  GigaScience
Experimenting with reproducibility in bioinformatics
Kim, Y.-M., Poline, J.-B., Dumas, G.
10.1101/143503 — Posted: 2017-06-20 — Discussion: 2022-01-22  GigaScience
NAT/NCS2-hound: A webserver for the detection and evolutionary classification of prokaryotic and eukaryotic nucleobase-cation symporters of the NAT/NCS2 family.
Chaliotis, A., Vlastaridis, P., Ntountoumi, C., Botou, M., Yalelis, V., Lazou, P., Tatsaki, K., Mossialos, D., Frillingos, S., Amoutzias, G.
10.1101/332452 — Posted: 2018-05-28 — Discussion: 2022-01-22  GigaScience
AMBER: Assessment of Metagenome BinnERs
Meyer, F., Hofmann, P., Belmann, P., Garrido-Oter, R., Fritz, A., Sczyrba, A., McHardy, A. C.
10.1101/239582 — Posted: 2017-12-25 — Discussion: 2022-01-22  GigaScience
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
Parekh, S., Ziegenhain, C., Vieth, B., Enard, W., Hellmann, I.
10.1101/153940 — Posted: 2017-06-22 — Discussion: 2022-01-22  GigaScience
Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction
Pospisil, J., Lukes, T., Bendesky, J., Fliegel, K., Spendier, K., Hagen, G. M.
10.1101/426296 — Posted: 2018-09-25 — Discussion: 2022-01-22  GigaScience
Independent assessment and improvement of wheat genome assemblies using Fosill jumping libraries
Lu, F.-H., McKenzie, N., Kettleborough, G., Heavens, D., Clark, M. D., Bevan, M. W.
10.1101/219352 — Posted: 2017-11-14 — Discussion: 2022-01-22  GigaScience

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