bioRxiv/medRxiv TRiP Review Activity

378 Reviews — GigaScience — All Subjects

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Species-level resolution of 16S rRNA gene amplicons sequenced through MinIONTM portable nanopore sequencer
Alfonso Benitez-Paez, Kevin Portune, Yolanda Sanz
10.1101/021758 — Posted: 2015-07-01 — Discussion: 2022-01-03  GigaScience
Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions
Victor Resco de Dios, Arthur Gessler, Juan Pedro Ferrio, Josu G. Alday, Michael Bahn, Jorge del Castillo, Sebastien Devidal, Sonia Garcia-Munoz, Zachary Kayler, Damien Landais, Paula Martin-Gomez, Alexandru Milcu, Clement Piel, Karin Pirhofer-Walzl, Olivier Ravel, Serajis Salekin, David T Tissue, Mark G Tjoelker, Jordi Voltas, Jacques Roy
10.1101/054593 — Posted: 2016-05-21 — Discussion: 2022-01-03  GigaScience
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
Minh Duc Cao, Devika Ganesamoorthy, Alysha Elliott, Huihui Zhang, Matthew Cooper, Lachlan Coin
10.1101/019356 — Posted: 2015-05-15 — Discussion: 2022-01-03  GigaScience
AGOUTI: improving genome assembly and annotation using transcriptome data
Simo V Zhang, Luting Zhuo, Matthew W Hahn
10.1101/033019 — Posted: 2015-11-26 — Discussion: 2022-01-03  GigaScience
Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature
Lange, M., Alako, B., Cochrane, G., Ghaffar, M., Mascher, M., Habekost, P.-K., Hillebrand, U., Scholz, U., Zunder, F., Freitag, J., Scholz, A. H.
10.1101/2021.05.10.443393 — Posted: 2021-05-10 — Discussion: 2022-01-03  GigaScience
NCBI BLAST+ integrated into Galaxy
Peter J. A. Cock, John M. Chilton, Björn Grüning, James E. Johnson, Nicola Soranzo
10.1101/014043 — Posted: 2015-01-21 — Discussion: 2022-01-03  GigaScience
ISA API: An open platform for interoperable life science experimental metadata
Johnson, D., Cochrane, K., Davey, R. P., Etuk, A., Gonzalez-Beltran, A., Haug, K., Izzo, M., Larralde, M., Lawson, T. N., Minotto, A., Moreno, P., Nainala, V. C., O'Donovan, C., Pireddu, L., Roger, P., Shaw, F., Steinbeck, C., Weber, R. J., Sansone, S.-A., Rocca-Serra, P.
10.1101/2020.11.13.382119 — Posted: 2020-11-16 — Discussion: 2022-01-03  GigaScience
An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis
Cushnan, D., Bennett, O., Berka, R., Bertolli, O., Chopra, A., Dorgham, S., Favaro, A., Ganepola, T., Halling-Brown, M., Imreh, G., Jacob, J., Jefferson, E., Lemarchand, F., Schofield, D., Wyatt, J. C., NCCID Collaborative
10.1101/2021.03.02.21252444 — Posted: 2021-03-03 — Discussion: 2021-11-24  GigaScience
Beyond brain age: Empirically-derived proxy measures of mental health
Dadi, K., Varoquaux, G., Houenou, J., Bzdok, D., Thirion, B., Engemann, D. A.
10.1101/2020.08.25.266536 — Posted: 2020-08-25 — Discussion: 2021-10-29  GigaScience
Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach.
Desvillechabrol, D., Bouchier, C., Kennedy, S., Cokelaer, T.
10.1101/092478 — Posted: 2016-12-08 — Discussion: 2021-10-26  GigaScience

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