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375 Reviews — GigaScience — All Subjects

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Tools and techniques for computational reproducibility
Stephen R Piccolo, Michael B Frampton
10.1101/022707 — Posted: 2015-07-17 — Discussion: 2022-01-03  GigaScience
A data repository and analysis framework for spontaneous neural activity recordings in developing retina
Stephen Eglen, Michael Weeks, Mark Jessop, Jennifer Simonotto, Tom Jackson, Evelyne Sernagor
10.1101/000455 — Posted: 2013-11-15 — Discussion: 2022-01-03  GigaScience
Species-level resolution of 16S rRNA gene amplicons sequenced through MinIONTM portable nanopore sequencer
Alfonso Benitez-Paez, Kevin Portune, Yolanda Sanz
10.1101/021758 — Posted: 2015-07-01 — Discussion: 2022-01-03  GigaScience
Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions
Victor Resco de Dios, Arthur Gessler, Juan Pedro Ferrio, Josu G. Alday, Michael Bahn, Jorge del Castillo, Sebastien Devidal, Sonia Garcia-Munoz, Zachary Kayler, Damien Landais, Paula Martin-Gomez, Alexandru Milcu, Clement Piel, Karin Pirhofer-Walzl, Olivier Ravel, Serajis Salekin, David T Tissue, Mark G Tjoelker, Jordi Voltas, Jacques Roy
10.1101/054593 — Posted: 2016-05-21 — Discussion: 2022-01-03  GigaScience
An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis
Cushnan, D., Bennett, O., Berka, R., Bertolli, O., Chopra, A., Dorgham, S., Favaro, A., Ganepola, T., Halling-Brown, M., Imreh, G., Jacob, J., Jefferson, E., Lemarchand, F., Schofield, D., Wyatt, J. C., NCCID Collaborative
10.1101/2021.03.02.21252444 — Posted: 2021-03-03 — Discussion: 2021-11-24  GigaScience
Beyond brain age: Empirically-derived proxy measures of mental health
Dadi, K., Varoquaux, G., Houenou, J., Bzdok, D., Thirion, B., Engemann, D. A.
10.1101/2020.08.25.266536 — Posted: 2020-08-25 — Discussion: 2021-10-29  GigaScience
Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach.
Desvillechabrol, D., Bouchier, C., Kennedy, S., Cokelaer, T.
10.1101/092478 — Posted: 2016-12-08 — Discussion: 2021-10-26  GigaScience
Open Humans: A platform for participant-centered research and personal data exploration
Greshake Tzovaras, B., Arvai, K., Dulaney, M., Estrada-Galinanes, V., Gunderson, B., Head, T., Lewis, D., Nov, O., Shaer, O., Bobe, J., Price Ball, M.
10.1101/469189 — Posted: 2018-11-14 — Discussion: 2021-09-13  GigaScience
Scalable Analysis of Multi-Modal Biomedical Data
Smith, J. M., Shi, Y., Benedikt, M., Nikolic, M.
10.1101/2020.12.14.422781 — Posted: 2020-12-15 — Discussion: 2021-09-12  GigaScience
Comparison of long read methods for sequencing and assembly of a plant genome
Murigneux, V., Rai, S. K., Furtado, A., Bruxner, T. J. C., Tian, W., Ye, Q., Wei, H., Yang, B., Harliwong, I., Anderson, E., Mao, Q., Drmanac, R., Wang, O., Peters, B., Xu, M., Wu, P., Topp, B., Coin, L. J. M., Henry, R. J.
10.1101/2020.03.16.992933 — Posted: 2020-03-18 — Discussion: 2021-08-29  GigaScience

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