bioRxiv/medRxiv TRiP Review Activity

375 Reviews — GigaScience — All Subjects

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TuBA: Tunable Biclustering Algorithm Reveals Clinically Relevant Tumor Transcriptional Profiles in Breast Cancer
Singh, A., Bhanot, G., Khiabanian, H.
10.1101/245712 — Posted: 2018-01-25 — Discussion: 2022-01-23  GigaScience
High-throughput phenotyping with deep learning gives insight into the genetic architecture of flowering time in wheat
Wang, X., Xuan, H., Evers, B., Shrestha, S., Pless, R., Poland, J.
10.1101/527911 — Posted: 2019-01-23 — Discussion: 2022-01-23  GigaScience
Genome sequence of the corn leaf aphid (Rhopalosiphum maidis Fitch)
Chen, W., Shakir, S., Bigham, M., Fei, Z., Jander, G.
10.1101/438499 — Posted: 2018-10-22 — Discussion: 2022-01-23  GigaScience
ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular data
Piccolo, S. R., Lee, T. J., Suh, E., Hill, K.
10.1101/675181 — Posted: 2019-06-19 — Discussion: 2022-01-23  GigaScience
A collection of yeast cellular electron cryotomography data
Gan, L., Ng, C. T., Chen, C., Cai, S.
10.1101/594432 — Posted: 2019-04-05 — Discussion: 2022-01-23  GigaScience
HAMAP rules as SPARQL - A portable annotation pipeline for genomes and proteomes
Bolleman, J., de Castro, E., Baratin, D., Gehant, S., Cuche, B. A., Auchincloss, A., COUDERT, E., Hulo, C., Masson, P., Pedruzzi, I., Rivoire, C., Xenarios, I., Redaschi, N., Bridge, A.
10.1101/615294 — Posted: 2019-04-24 — Discussion: 2022-01-23  GigaScience
Single-cell Transcriptomic Landscape of Nucleated Cells in Umbilical Cord Blood
Zhao, Y., Li, X., Wang, J., Wan, Z., Gao, K., Yi, G., Wang, X., Wu, J., Fan, B., Zhang, W., Chen, F., Yang, H., Wang, J., Xu, X., Li, B., Liu, S., Zhao, W., Hou, Y., Liu, X.
10.1101/346106 — Posted: 2018-06-13 — Discussion: 2022-01-23  GigaScience
duphold: scalalable, depth-based annotation and curation of high-confidence structural variant calls.
Pedersen, B. S., Quinlan, A. R.
10.1101/465385 — Posted: 2018-11-08 — Discussion: 2022-01-23  GigaScience
Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research
Strijk, J. S., Hinsinger, D. D., Zhang, F.-P., Cao, K.
10.1101/650424 — Posted: 2019-05-26 — Discussion: 2022-01-23  GigaScience
Integrating genomic resources to present full gene and promoter capture probe sets for bread wheat
Gardiner, L.-J., Brabbs, T., Akhunova, A., Jordan, K., Budak, H., Richmond, T., Singh, S., Catchpole, L., Akhunov, E., Hall, A.
10.1101/363663 — Posted: 2018-07-06 — Discussion: 2022-01-23  GigaScience

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