bioRxiv/medRxiv TRiP Review Activity

406 Reviews — GigaScience — All Subjects

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HTSlib - C library for reading/writing high-throughput sequencing data
Bonfield, J. K., Marshall, J., Danecek, P., Li, H., Ohan, V., Whitwham, A., Keane, T., Davies, R. M.
10.1101/2020.12.16.423064 — Posted: 2020-12-16 — Discussion: 2022-01-24  GigaScience
The Gene-Rich Genome of the Scallop Pecten maximus
Kenny, N. J., McCarthy, S. A., Dudchenko, O., James, K., Betteridge, E., Corton, C., Dolucan, J., Mead, D., Oliver, K., Omer, A. D., Pelan, S., Ryan, Y., Sims, Y., Skelton, J., Smith, M., Torrance, J., Weisz, D., Wipat, A., Aiden, E. L., Howe, K., Williams, S. T.
10.1101/2020.01.08.887828 — Posted: 2020-01-09 — Discussion: 2022-01-24  GigaScience
Sequencing smart: De novo sequencing and assembly approaches for non-model mammals.
Etherington, G. J., Heavens, D., Baker, D., Lister, A., McNelly, R., Garcia Accinelli, G., Clavijo, B. J., Macaulay, I., Haerty, W., Di Palma, F.
10.1101/723890 — Posted: 2019-08-05 — Discussion: 2022-01-24  GigaScience
BiG-SLiCE: A Highly Scalable Tool Maps the Diversity of 1.2 Million Biosynthetic Gene Clusters
Kautsar, S. A., van der Hooft, J. J. J., de Ridder, D., Medema, M. H.
10.1101/2020.08.17.240838 — Posted: 2020-08-18 — Discussion: 2022-01-24  GigaScience
Understanding the impact of preprocessing pipelines on neuroimaging cortical surface analyses
Bhagwat, N., Barry, A., Dickie, E. W., Brown, S. T., Devenyi, G. A., Hatano, K., DuPre, E., Dagher, A., Chakravarty, M. M., Greenwood, C. M. T., Misic, B., Kennedy, D. N., Poline, J.-B.
10.1101/2020.05.22.100180 — Posted: 2020-05-26 — Discussion: 2022-01-24  GigaScience
Reduced chromatin accessibility underlies gene expression differences in homologous chromosome arms of hexaploid wheat and diploid Aegilops tauschii
Lu, F.-H., McKenzie, N., Gardiner, L.-J., Luo, M., Hall, A., Bevan, M. W.
10.1101/571133 — Posted: 2019-03-07 — Discussion: 2022-01-24  GigaScience
Discovering Data Access and Use Requirements Using the Data Tags Suite (DATS) Model
Alter, G., Gonzalez-Beltran, A., Ohno-Machado, L., Rocca-Serra, P.
10.1101/518571 — Posted: 2019-01-11 — Discussion: 2022-01-23  GigaScience
Artifact-free whole-slide imaging with structured illumination microscopy and Bayesian image reconstruction
Johnson, K., Hagen, G. M.
10.1101/765396 — Posted: 2019-09-11 — Discussion: 2022-01-23  GigaScience
Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes
Conte, M. A., Joshi, R., Moore, E. C., Nandamuri, S. P., Gammerdinger, W. J., Roberts, R. B., Carleton, K. L., Lien, S., Kocher, T. D.
10.1101/383992 — Posted: 2018-08-03 — Discussion: 2022-01-23  GigaScience
RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements
Osipova, E., Hecker, N., Hiller, M.
10.1101/696922 — Posted: 2019-07-09 — Discussion: 2022-01-23  GigaScience

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