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442 Reviews — GigaScience — All Subjects

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From partial to whole genome imputation of SARS-CoV-2 for epidemiological surveillance
Ortuno, F. M., Loucera, C., Casimiro-Soriguer, C. S., Lepe, J. A., Camacho Martinez, P., Merino Diaz, L., Chueca, N., de Salazar, A., Garcia, F., Perez-Florido, J., Dopazo, J.
10.1101/2021.04.13.439668 — Posted: 2021-04-13 — Discussion: 2022-03-14  GigaScience
MBGC: Multiple Bacteria Genome Compressor
Grabowski, S. P., Kowalski, T. M.
10.1101/2020.12.09.411678 — Posted: 2020-12-09 — Discussion: 2022-03-14  GigaScience
Linking big biomedical datasets to modular analysis with Portable Encapsulated Projects
Sheffield, N. C., Stolarczyk, M., Reuter, V. P., Rendeiro, A.
10.1101/2020.10.08.331322 — Posted: 2020-10-08 — Discussion: 2022-03-14  GigaScience
To assemble or not to resemble -- A validated Comparative Metatranscriptomics Workflow (CoMW)
Anwar, M. Z., Lanzen, A., Bang-Andreasen, T., Jacobsen, C. S.
10.1101/642348 — Posted: 2019-05-27 — Discussion: 2022-03-14  GigaScience
PathwayMatcher: multi-omics pathway mapping and proteoform network generation
Hernandez Sanchez, L. F., Burger, B., Horro, C., Fabregat, A., Johansson, S., Njolstad, P. R., Barsnes, H., Hermjakob, H., Vaudel, M.
10.1101/375097 — Posted: 2018-07-23 — Discussion: 2022-03-14  GigaScience
Arteria: An automation system for a sequencing core facility
Dahlberg, J., Hermansson, J., Sturlaugsson, S., Larsson, P.
10.1101/214858 — Posted: 2017-11-06 — Discussion: 2022-03-14  GigaScience
Improved chromosome level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) based on SMRT Sequencing and linkage map.
Blande, D., Smolander, O.-P., Ahola, V., Rastas, P., Tanskanen, J., Kammonen, J. I., Oostra, V., Pellegrini, L., Ikonen, S., Dallas, T., DiLeo, M. F., Duplouy, A., Duru, I. C., Halimaa, P., Kahilainen, A., Kuwar, S. S., Karenlampi, S. O., Lafuente, E., Luo, S., Makkonen, J., Nair, A., Celorio-Mancera, M. d. l. P., Pennanen, V., Ruokolainen, A., Sundell, T., Tervahauta, A. I., Twort, V., van Bergen, E., Osterman-Udd, J., Paulin, L., Frilander, M. J., Auvinen, P., Saastamoinen, M.
10.1101/2020.11.03.364950 — Posted: 2020-11-04 — Discussion: 2022-03-14  GigaScience
DENTIST - using long reads to close assembly gaps at high accuracy
Ludwig, A., Pippel, M., Myers, G., Hiller, M.
10.1101/2021.02.26.432990 — Posted: 2021-02-27 — Discussion: 2022-03-09  GigaScience
Sim3C: Simulation Of HiC And Meta3C Proximity Ligation Sequencing Technologies
DeMaere, M. Z., Darling, A. E.
10.1101/134452 — Posted: 2017-05-15 — Discussion: 2022-02-20  GigaScience
Conventional and hyperspectral time-series imagingof maize lines widely used in field trials
Liang, Z., Pandey, P., Stoerger, V., Xu, Y., Qiu, Y., Ge, Y., Schnable, J. C.
10.1101/169045 — Posted: 2017-07-28 — Discussion: 2022-02-20  GigaScience

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