bioRxiv/medRxiv TRiP Review Activity

122 Reviews — eLife — Bioinformatics

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Pan-tissue Transcriptome Analysis Reveals Sex-dimorphic Human Aging
Wang, S., Dong, D., Li, X., Wang, Z.
10.1101/2023.05.26.542373 — Posted: 2023-05-26 — Discussion: 2025-07-09  eLife
The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments
Li, T., Alvarez, M., Liu, C., Abuhanna, K., Sun, Y., Ernst, J., Plath, K., Balliu, B., Luo, C., Zaitlen, N.
10.1101/2025.02.06.636969 — Posted: 2025-02-08 — Discussion: 2025-07-08  eLife
Artificial Intelligence uncovers Evolutionarily Conserved Intracellular Allosteric Modulators of GPCR-Gα interface.
Mohanty, S. K., Mittal, A., Gaur, A., Solanki, S., Kumar, S., Duari, S., Arora, S., Gautam, V., Dixit, N. K., Ghosh, T. S., Sengupta, D., Gupta, S. K., Murugan, N. A., Ahuja, G.
10.1101/2023.02.14.528587 — Posted: 2023-02-15 — Discussion: 2025-05-23  eLife
Predicting the effect of CRISPR-Cas9-based epigenome editing
Batra, S. S., Cabrera, A., Spence, J. P., Hilton, I., Song, Y. S.
10.1101/2023.10.03.560674 — Posted: 2023-10-03 — Discussion: 2025-05-23  eLife
Unsupervised reference-free inference reveals unrecognized regulated transcriptomic complexity in human single cells
Dehghannasiri, R., Henderson, G., Bierman, R., Chaung, K., Baharav, T. Z., Wang, P. L., Salzman, J.
10.1101/2022.12.06.519414 — Posted: 2022-12-07 — Discussion: 2025-05-22  eLife
Pathway activation model for personalized prediction of drug synergy
Trac, Q. T., Huang, Y., Erkers, T., Östling, P., Bohlin, A., Osterroos, A., Vesterlund, M., Jafari, R., Siavelis, I., Backvall, H., Kiviluoto, S., Orre, L., Rantalainen, M., Lehtiö, J., Lehmann, S., Kallioniemi, O., Pawitan, Y., Vu, T. N.
10.1101/2024.06.05.597583 — Posted: 2024-06-08 — Discussion: 2025-05-20  eLife
MorphoNet 2.0: An innovative approach for qualitative assessment and segmentation curation of large-scale 3D time-lapse imaging datasets
Gallean, B., Laurent, T., Biasuz, K., Clement, A., Faraj, N., Lemaire, P., Faure, E.
10.1101/2025.02.21.639560 — Posted: 2025-03-01 — Discussion: 2025-05-12  eLife
Identification and classification of ion-channels across the tree of life: Insights into understudied CALHM channels
Taujale, R., Park, S. J., Gravel, N., Soleymani, S., Carter, R., Boyd, K., Keuning, S., Ruan, Z., Lü, W., Kannan, N.
10.1101/2025.02.10.637530 — Posted: 2025-02-18 — Discussion: 2025-05-09  eLife
AACDB: Antigen-Antibody Complex Database -- a Comprehensive Database Unlocking Insights into Interaction Interface
Zhou, Y., Liu, W., Huang, Z., Gou, Y., Liu, S., Jiang, L., Yang, Y., Huang, J.
10.1101/2024.11.12.623267 — Posted: 2024-11-17 — Discussion: 2025-05-09  eLife
Drug combination prediction for cancer treatment using disease-specific drug response profiles and single-cell transcriptional signatures
Osorio, D., Tekpli, X., Kristensen, V. N., Kuijjer, M. L.
10.1101/2022.03.31.486602 — Posted: 2022-04-01 — Discussion: 2025-05-09  eLife

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