bioRxiv/medRxiv TRiP Review Activity

336 Reviews — GigaScience — All Subjects

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DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data
Simon, L. M., Yan, F., Zhao, Z.
10.1101/864165 — Posted: 2019-12-05 — Discussion: 2022-01-24  GigaScience
CNVpytor: a tool for CNV/CNA detection and analysis from read depth and allele imbalance in whole genome sequencing
Suvakov, M., Panda, A., Diesh, C., Holmes, I., Abyzov, A.
10.1101/2021.01.27.428472 — Posted: 2021-01-27 — Discussion: 2022-01-24  GigaScience
Genome Diversity in Ukraine
Oleksyk, T. K., Wolfsberger, W. W., Weber, A., Shchubelka, K., Oleksyk, O. T., Levchuk, O., Patrus, A., Lazar, N., Castro-Marquez, S. O., Boldyzhar, P., Urbanovych, A., Stakhovska, V., Malyar, K., Chervyakova, S., Podoroha, O., Kovalchuk, N., Hasynets, Y., Rodriguez-Flores, J. L., Medley, S., Battistuzzi, F. U., Liu, R., Hou, Y., Chen, S., Yang, H., Yeager, M., Dean, M., Mills, R. E., Smolanka, V.
10.1101/2020.08.07.238329 — Posted: 2020-08-07 — Discussion: 2022-01-24  GigaScience
Multivariate GWAS: Generalized Linear Models, Prior Weights, and Double Sparsity
Chu, B. B., Keys, K. L., Sinsheimer, J. S., Lange, K.
10.1101/697755 — Posted: 2019-07-11 — Discussion: 2022-01-24  GigaScience
Sequencing smart: De novo sequencing and assembly approaches for non-model mammals.
Etherington, G. J., Heavens, D., Baker, D., Lister, A., McNelly, R., Garcia Accinelli, G., Clavijo, B. J., Macaulay, I., Haerty, W., Di Palma, F.
10.1101/723890 — Posted: 2019-08-05 — Discussion: 2022-01-24  GigaScience
iGenomics: Comprehensive DNA Sequence Analysis on your Smartphone
Palatnick, A., Zhou, B., Ghedin, E., Schatz, M. C.
10.1101/2020.02.11.944132 — Posted: 2020-02-12 — Discussion: 2022-01-24  GigaScience
High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome
Marrano, A., Britton, M., Zaini, P. A., Zimin, A., Workman, R., Puiu, D., Bianco, L., Di Pierro, E. A., Allen, B., Chakraborty, S., Troggio, M., Leslie, C., Timp, W., Dendekar, A., Salzberg, S., Neale, D. B.
10.1101/809798 — Posted: 2019-10-17 — Discussion: 2022-01-24  GigaScience
A single-cell RNA-seq Training and Analysis Suite using the Galaxy Framework
Tekman, M., Batut, B., Ostrovsky, A., Antoniewski, C., Clements, D., Ramirez, F., Etherington, G. J., Hotz, H.-R., Scholtalbers, J., Manning, J. R., Bellenger, L., Doyle, M. A., Heydarian, M., Huang, N., Soranzo, N., Moreno, P., Papatheodorou, I., Nekrutenko, A., Taylor, J., Blankenberg, D., Backofen, R., Grüning, B.
10.1101/2020.06.06.137570 — Posted: 2020-06-08 — Discussion: 2022-01-24  GigaScience
BiSulfite Bolt: A BiSulfite Sequencing Analysis Platform
Farrell, C., Thompson, M., Tosevska, A., Oyetunde, A., Pellegrini, M.
10.1101/2020.10.06.328559 — Posted: 2020-10-08 — Discussion: 2022-01-24  GigaScience
Streamlining Data-Intensive Biology With Workflow Systems
Reiter, T., Brooks, P. T., Irber, L., Joslin, S. E. K., Reid, C. M., Scott, C., Brown, C. T., Pierce, N. T.
10.1101/2020.06.30.178673 — Posted: 2020-07-01 — Discussion: 2022-01-24  GigaScience

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