bioRxiv/medRxiv TRiP Review Activity

394 Reviews — GigaScience — All Subjects

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Whole-genome sequencing of Chinese native goat offers biological insights into cashmere fiber formation
Han, H., Yang, M.-M., Jiang, D., Zhang, X.-J., Wei, Q., Chen, T., Wang, Q.-J., Yang, C.-Y., Wulan, B., Zhang, T.-T., Gang, G., Mengke, D., LI, B., Deng, W.-D., Miao, Z.-P., Wang, R., Zhang, Q.-F., Li, L., CHao, S.-Y., Fang, M., Li, Y.
10.1101/2021.11.06.467539 — Posted: 2021-11-06 — Discussion: 2023-03-24  GigaScience
Utilizing artificial intelligence system to build the digital structural proteome of reef-building corals
Zhu, Y., Liao, X., Han, T., Chen, J.- Y., He, C., Lu, Z.
10.1101/2022.06.27.497859 — Posted: 2022-06-30 — Discussion: 2023-03-24  GigaScience
Making Common Fund data more Findable: Catalyzing a Data Ecosystem
Charbonneau, A. L., Brady, A., Brown, C. T., Sansone, S.-A., Ma'ayan, A., Wagner, R., Carter, R., Harris, R. M., Gingrich, A., Lim, M. C. W., Munro, J. B., Clarke, D. J. B., Creasy, H. H., Rocca-Serra, P., Jeon, M., Liming, R. L., Schuler, R. E., Romano, C., Chard, K., Giglio, M., Nadendla, S., Hodges, T. K., Mandal, M., Canchi, S., Waldrop, A., White, O.
10.1101/2021.11.05.467504 — Posted: 2021-11-08 — Discussion: 2023-03-24  GigaScience
What the Phage: A scalable workflow for the identification and analysis of phage sequences
Marquet, M., Hölzer, M., Pletz, M. W., Viehweger, A., Makarewicz, O., Ehricht, R., Brandt, C.
10.1101/2020.07.24.219899 — Posted: 2020-07-25 — Discussion: 2023-03-24  GigaScience
Contrast Subgraphs Allow Comparing Homogeneous and Heterogeneous Networks Derived from Omics Data
Lanciano, T., Savino, A., Porcu, F., Cittaro, D., Bonchi, F., Provero, P.
10.1101/2022.07.26.501547 — Posted: 2022-07-27 — Discussion: 2023-03-05  GigaScience
Workflow sharing with automated metadata validation and test execution to improve the reusability of published workflows
Suetake, H., Fukusato, T., Igarashi, T., Ohta, T.
10.1101/2022.07.08.499265 — Posted: 2022-07-10 — Discussion: 2023-03-05  GigaScience
TAMPA: interpretable analysis and visualization of metagenomics-based taxon abundance profiles
Sarwal, V., Brito, J., Mangul, S., Koslicki, D. J.
10.1101/2022.04.28.489926 — Posted: 2022-04-29 — Discussion: 2023-03-05  GigaScience
A Chromosome-level Assembly of the Japanese Eel Genome, Insights into Gene Duplication and Chromosomal Reorganization
WANG, H., WAN, H. T., WU, B., JIAN, J., NG, A. H., CHUNG, C. Y.-L., CHOW, E. Y.-C., ZHANG, J., WONG, A. O., LAI, K. P., CHAN, T. F., Zhang, E. L., WONG, C. K.-C.
10.1101/2022.06.28.497880 — Posted: 2022-07-01 — Discussion: 2023-03-04  GigaScience
Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex-predation
Shukla, H., Suryamohan, K., Khan, A., Mohan, K., Perumal, R., Mathew, O., Menon, R., Dixon, M. D., Muraleedharan, M., Kuriakose, B., Michael, S., Krishnakutty, S., Zachariah, A., Seshagiri, S., Ramakrishnan, U.
10.1101/2022.05.14.491975 — Posted: 2022-05-17 — Discussion: 2023-03-04  GigaScience
xAtlas: Scalable small variant calling across heterogeneous next-generation sequencing experiments
Farek, J., Hughes, D., Mansfield, A., Krasheninina, O., Nasser, W., Sedlazeck, F. J., Khan, Z., Venner, E., Metcalf, G., Boerwinkle, E., Muzny, D. M., Gibbs, R. A., Salerno, W.
10.1101/295071 — Posted: 2018-04-05 — Discussion: 2023-03-04  GigaScience

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