bioRxiv/medRxiv TRiP Review Activity

40 Reviews — Review Commons — Bioinformatics

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A pocket-centric framework for selective targeting of amyloid fibril polymorphs
Ossard, G., Ciambur, C. B., Melki, R., Sperandio, O., Romero, E.
10.64898/2026.02.25.707901 — Posted: 2026-02-26 — Discussion: 2026-09-17  Review Commons
Modeling causal signal propagation in multi-omic factor space with COSMOS
Dugourd, A., Lafrenz, P., Mananes, D., Fallegger, R., Kroger, A.-C., Turei, D., Shtylla, B., Saez-Rodriguez, J.
10.1101/2024.07.15.603538 — Posted: 2024-07-17 — Discussion: 2026-08-17  Review Commons
Cell type composition drives patient stratification in single-cell RNA-seq cohorts
Halter, C., Andreatta, M., Carmona, S.
10.64898/2026.03.27.714811 — Posted: 2026-03-31 — Discussion: 2026-07-10  Review Commons
Benchmarking tissue- and cell type-of-origin deconvolution in cell-free transcriptomics
Ioannou, A., Friman, E. T., Daub, C. O., Bickmore, W. A., Biddie, S. C.
10.64898/2026.03.05.709833 — Posted: 2026-03-09 — Discussion: 2026-07-06  Review Commons
coelsch: Platform-agnostic single-cell analysis of meiotic recombination events
Parker, M. T., Amar, S., Freudigmann, J., Walkemeier, B., Dong, X., Solier, V., Marek, M., Huettel, B., Mercier, R., Schneeberger, K.
10.64898/2026.02.02.701279 — Posted: 2026-02-04 — Discussion: 2026-06-11  Review Commons
Modelling multicellular coordination by bridging cell-cell communication and intracellular regulation through multilayer networks
Trimbour, R., Ramirez Flores, R. O., Saez-Rodriguez, J., Cantini, L.
10.64898/2026.01.20.700561 — Posted: 2026-01-22 — Discussion: 2026-05-27  Review Commons
Sample-level modeling of single-cell data at scale with tinydenseR
Milanez-Almeida, P., Schildknecht, D., Linder, M., Brachmann, S. M., Weiss, A., Adler, F., Lenticchia, S. C., Meistertzheim, M., Wild, S., Cuttat, R., Jayaraman, P., Lee, L. H., Mulvey, T., Hassounah, N., Crafts, G., Quinn, D. S., Orlando, E. J.
10.1101/2025.11.26.690752 — Posted: 2025-11-30 — Discussion: 2026-05-05  Review Commons
TOGGLE identifies fate and function process within a single type of mature cell through single-cell transcriptomics
Chen, J., Jiang, E., Chen, Z., Liu, K., Sun, T., Nong, Y., Kong, Y., Yuan, T., Daga, P., Dai, C. C., Yan, Y., Ge, J., Wu, H., Yang, T., Wang, S., Su, Z., Li, C., Li, Y., Yang, K., Singhal, R. A., Carll, A. P.
10.1101/2025.01.01.631041 — Posted: 2025-01-02 — Discussion: 2026-03-19  Review Commons
The Hok bacterial toxin: diversity, toxicity, distribution and genomic localization
Escalera-Maurer, A., Messineo, A., Renault, T. T., Nicollin, E., Castaneda-Sastre, E., Brunot, M., Berrehail, C., Le Rhun, A.
10.1101/2025.08.07.668861 — Posted: 2025-08-07 — Discussion: 2026-01-26  Review Commons
Interpreting the Effects of DNA Polymerase Variants at the Structural Level
Arnaudi, M., Krzesinska, K., Beltrame, L., Tiberti, M., Nilbert, M., Rohlin, A., Papaleo, E.
10.1101/2025.08.04.653638 — Posted: 2025-08-04 — Discussion: 2026-01-23  Review Commons

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