Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

467 Articles

Exploring the coronavirus epidemic using the new WashU Virus Genome Browser
Flynn, J., Purushotham, D., Choudhary, M. N., Zhuo, X., Fan, C., Matt, G., Li, D., Wang, T.
10.1101/2020.02.07.939124 — Posted: 2020-02-11
Ultrastructural Visualization of 3D Chromatin Folding Using Serial Block-Face Scanning Electron Microscopy and In Situ Hybridization (3D-EMISH)
Trzaskoma, P., Ruszczycki, B., Lee, B., Pels, K. K., Krawczyk, K., Bokota, G., Szczepankiewicz, A. A., Aaron, J., Walczak, A., Sliwinska, M., Magalska, A., Kadloff, M., Wolny, A., Parteka, Z., Arabasz, S., Kiss- Arabasz, M., Plewczynski, D., Ruan, Y., Wilczynski, G. M.
10.1101/2020.02.05.935106 — Posted: 2020-02-06
Probing multi-way chromatin interaction with hypergraph representation learning
Zhang, R., Ma, J.
10.1101/2020.01.22.916171 — Posted: 2020-01-23
Memory sequencing reveals heritable single cell gene expression programs associated with distinct cellular behaviors
Shaffer, S. M., Emert, B. L., Reyes-Hueros, R., Cote, C., Harmange, G., Sizemore, A. E., Gupte, R., Torre, E., Singh, A., Bassett, D. S., Raj, A.
10.1101/379016 — Posted: 2019-12-21
Cell cycle dynamics of lamina associated DNA
van Schaik, T., Vos, M., Peric-Hupkes, D., van Steensel, B.
10.1101/2019.12.19.881979 — Posted: 2019-12-19
Chromosomal-level genome assembly of the scimitar-horned oryx: insights into diversity and demography of a species extinct in the wild
Humble, E., Dobrynin, P., Senn, H., Chuven, J., Scott, A. F., Mohr, D. W., Dudchenko, O., Omer, A. D., Colaric, Z., Lieberman Aiden, E., Wildt, D., Oliagi, S., Tamazian, G., Pukazhenthi, B., Ogden, R., Koepfli, K.-P.
10.1101/867341 — Posted: 2019-12-08
Efficient Homology-directed Repair with Circular ssDNA Donors
Iyer, S., Mir, A., Ibraheim, R., Lee, J., VegaBadillo, J., Roscoe, B., Zhu, L. J., Liu, P., Luk, K., Mintzer, E., de Brito, J. S., Zamore, P., Sontheimer, E. J., Wolfe, S.
10.1101/864199 — Posted: 2019-12-05
High-Resolution 3D Fluorescent Imaging of Intact Tissues
El-Nachef, D., Martinson, A. M., Yang, X., Murry, C. E., MacLellan, W. R.
10.1101/855254 — Posted: 2019-11-26
Capturing cell type-specific chromatin structural patterns by applying topic modeling to single-cell Hi-C data
Kim, H.-J., Yardimici, G. G., Bonora, G., Ramani, V., Liu, J., Qiu, R., Lee, C., Hesson, J., Ware, C. B., Shendure, J., Duan, Z., Noble, W. S.
10.1101/534800 — Posted: 2019-11-18
Genetic screening for single-cell variability modulators driving therapy resistance
Torre, E. A., Arai, E., Bayatpour, S., Beck, L. E., Emert, B. L., Shaffer, S. M., Mellis, I. A., Fane, M., Alicea, G., Budinich, K. A., Weeraratna, A., Shi, J., Raj, A.
10.1101/638809 — Posted: 2019-11-10

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