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21 Articles

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Scaling deep identifiable models enables zero-shot characterization of single-cell biological states
Dong, M., Agrawal, K., Fan, R., Sefik, E., Flavell, R. A., Kluger, Y.
10.1101/2023.11.11.566161 — Posted: 2024-12-18
A Transcriptional Signature of Induced Neurons Differentiates Virologically Suppressed People Living With HIV from People Without HIV
Ostermann, P. N., Wu, Y., Bowler, S. A., Siddiqui, M. A., Herrera, A., Sidharta, M., Ramnarine, K., Martinez-Meza, S., St. Bernard, L. A., Nixon, D. F., Jones, R. B., Yamashita, M., Ndhlovu, L. C., Zhou, T., Evering, T. H.
10.1101/2024.10.22.619617 — Posted: 2024-10-22
SIMVI reveals intrinsic and spatial-induced states in spatial omics data
Dong, M., Su, D., Kluger, H., Fan, R., Kluger, Y.
10.1101/2023.08.28.554970 — Posted: 2024-10-11
Drug Metabolism and Transport Capacity of Endothelial Cells, Pericytes, and Astrocytes: Implications for CNS Drug Disposition
Wilkins, H. N., Knerler, S. A., Warshanna, A., Ortiz, R. C., Haas, K., Orsburn, B. C., Williams, D. W.
10.1101/2024.08.01.606165 — Posted: 2024-08-05
Microglia and macrophages alterations in the CNS during acute SIV infection: a single-cell analysis in rhesus macaques
Xu, X., Niu, M., Lamberty, B. G., Emanuel, K., Trease, A. J., Tabassum, M., Lifson, J. D., Fox, H. S.
10.1101/2024.04.04.588047 — Posted: 2024-04-04
FABEL: Forecasting Animal Behavioral Events with Deep Learning-Based Computer Vision
Catto, A., O'Connor, R., Braunscheidel, K. M., Kenny, P. J., Shen, L.
10.1101/2024.03.15.584610 — Posted: 2024-03-17
ScISOr-ATAC reveals convergent and divergent splicing and chromatin specificities between matched cell types across cortical regions, evolution, and in Alzheimer's disease.
Hu, W., Foord, C., Hsu, J., Fan, L., Corley, M. J., Bhatia, T. N., Xu, S., Belchikov, N., He, Y., Pang, A. P., Lanjewar, S. N., Jarroux, J., Joglekar, A., Milner, T. A., Ndhlovu, L., Zhang, J., Butelman, E., Sloan, S. A., Lee, V. M., Gan, L., Tilgner, H. U.
10.1101/2024.02.24.581897 — Posted: 2024-02-28
Cocaine Regulates Antiretroviral Therapy CNS Access Through Pregnane-X Receptor-Mediated Drug Transporter and Metabolizing Enzyme Modulation at the Blood Brain Barrier
Fridman, L. B., Knerler, S., Price, A.-S., Colon Ortiz, R., Mercado, A., Wilkins, H., Flores, B. R., Orsburn, B., Williams, D.
10.1101/2023.07.28.551042 — Posted: 2023-07-29
Roadmap For The Expression Of Canonical and Extended Endocannabinoid System Receptors and Proteins in Peripheral Organs of Preclinical Animal Models
Rosado-Franco, J. J., Ellison, A. L., White, C. J., Price, A. S., Moore, C. F., Williams, R. E., Fridman, L. B., Weerts, E. M., Williams, D. W.
10.1101/2023.06.10.544455 — Posted: 2023-06-22
Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development
Joglekar, A., Hu, W., Zhang, B., Narykov, O., Diekhans, M., Balacco, J., Ndhlovu, L., Milner, T. A., Fedrigo, O., Jarvis, E. D., Sheynkman, G. M., Korkin, D., Ross, M. E., Tilgner, H. U.
10.1101/2023.04.02.535281 — Posted: 2023-04-04

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