Channel:  NCI Human Tumor Atlas Network

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

73 Articles

Single-cell analysis of human lung epithelia reveals concomitant expression of the SARS-CoV-2 receptor ACE2 with multiple virus receptors and scavengers in alveolar type II cells
Han, G., Sinjab, A., Treekitkarnmongkol, W., Brennan, P., Hara, K., Chang, K., Bogatenkova, E., Sanchez-Espiridion, B., Behrens, C., Gao, B., Girard, L., Zhang, J., Sepesi, B., Cascone, T., Byers, L., Gibbons, D. L., Chen, J., Moghaddam, S. J., Ostrin, E. J., Fujimoto, J., Shay, J., Heymach, J. V., Minna, J. D., Dubinett, S., Scheet, P. A., Wistuba, I. I., Hill, E., Telesco, S., Stevenson, C., Spira, A. E., Wang, L., Kadara, H.
10.1101/2020.04.16.045617 — Posted: 2020-04-17
VISTA: Virtual ImmunoSTAining for pancreatic disease quantification in murine cohorts
Ternes, L., Huang, G., Lanciault, C., Thibault, G., Riggers, R., Gray, J. W., Muschler, J., Chang, Y. H.
10.1101/2020.04.01.020842 — Posted: 2020-04-02
A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors
Slyper, M., Porter, C. B. M., Ashenberg, O., Waldman, J., Drokhlyansky, E., Wakiro, I., Smillie, C., Smith-Rosario, G., Wu, J., Dionne, D., Vigneau, S., Jane-Valbuena, J., Napolitano, S., Su, M.-J., Patel, A. G., Karlstrom, A., Gritsch, S., Nomura, M., Waghray, A., Gohil, S. H., Tsankov, A. M., Jerby-Arnon, L., Cohen, O., Klughammer, J., Rosen, Y., Gould, J., Li, B., Nguyen, L., Wu, C. J., Izar, B., Haq, R., Hodi, F. S., Yoon, C. H., Hata, A. N., Baker, S. J., Suva, M. L., Bueno, R., Stover, E. H., Matulonis, U. A., Clay, M. R., Dyer, M. A., Collins, N. B., Wagle, N., Rotem, A., Johnson, B. E.
10.1101/761429 — Posted: 2020-03-30
The Evolution of Human Cancer Gene Duplications across Mammals
Tollis, M., Schneider-Utaka, A. K., Maley, C. C.
10.1101/2020.03.05.978965 — Posted: 2020-03-05
Accelerated single cell seeding in relapsed multiple myeloma
Landau, H. J., Yellapantula, V., Diamond, B. J., Rustad, E. H., Maclachlan, K., Gundem, G., Medina-Martinez, J., Arango Ossa, J. E., Levine, M., Zhou, Y., Rajya, K. L., Baez, P., Attiyeh, M., Makohon-Moore, A., Zhang, L., Boyle, E. E., Ashby, C., Blaney, P., Patel, M., Zhang, Y., Dogan, A., Chung, D., Giralt, S., Lahoud, O. B., Peled, J., Scordo, M., Shah, G., Hassoun, H., Korde, N. S., Lesokhin, A. M., Lu, S., Mailankody, S., Shah, U. A., Smith, E., Hultcrantz, M. L., Ulaner, G., van Rhee, F., Morgan, G., Landgren, O., Papaemmanuil, E., Iacobuzio-Donahue, C. A., Maura, F.
10.1101/2020.02.25.963272 — Posted: 2020-02-26
RESTORE: Robust intEnSiTy nORmalization mEthod for Multiplexed Imaging
Chang, Y. H., Chin, K., Thibault, G., Eng, J., Burlingame, E., Gray, J. W.
10.1101/792770 — Posted: 2020-01-31
Massively parallel, time-resolved single-cell RNA sequencing with scNT-Seq
Qiu, Q., Hu, P., Govek, K. W., Camara, P. G., Wu, H.
10.1101/2019.12.19.882050 — Posted: 2020-01-02
Diverse noncoding mutations contribute to deregulation of cis-regulatory landscape in pediatric cancers
He, B., Gao, P., Ding, Y.-y., Chen, C.-h., Chen, G., Chen, C., Kim, H., Tasian, S. K., Hunger, S. P., Tan, K.
10.1101/843102 — Posted: 2019-11-15
Minimal Barriers to Invasion During Human Colorectal Tumor Growth
Ryser, M. D., Mallo, D., Hall, A., Hardman, T., King, L. M., Sorribes, I. C., Maley, C. C., Marks, J. R., Hwang, E. S., Shibata, D.
10.1101/842203 — Posted: 2019-11-14
Dual indexed design of in-Drop single-cell RNA-seq libraries improves sequencing quality and throughput
Southard-Smith, A. N., Simmons, A. J., Chen, B., Jones, A. L., Ramirez-Solano, M. A., Vega, P. N., Scurrah, C. R., Zhao, Y., Brenan, M. J., Xuan, J., Porter, E. B., Chen, X., Brenan, C. J. H., Liu, Q., Quigley, L. N. M., Lau, K. N.
10.1101/835488 — Posted: 2019-11-08

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