Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

152 Articles

Profiling of transcribed cis-regulatory elements in single cells
Moody, J., Kouno, T., Suzuki, A., Shibayama, Y., Terao, C., Chang, J.-C., Lopez-Redondo, F., Yip, C. W., Severin, J., Suetsugu, H., Ando, Y., Yamamoto, K., Carninci, P., Shin, J. W., Hon, C.-C.
10.1101/2021.04.04.438388 — Posted: 2021-04-21
Implicating Gene and Cell Networks Responsible for Differential COVID-19 Host Responses via an Interactive Single Cell Web Portal
Jin, K., Bardes, E. E., Mitelpunkt, A., Wang, Y. J., Bhatnagar, S., Sengupta, S., Krummel, D. P., Rothenberg, M. E., Aronow, B. J.
10.1101/2021.06.07.447287 — Posted: 2021-06-16
Single nucleus pituitary transcriptomic and epigenetic landscape reveals human stem cell heterogeneity with diverse regulatory mechanisms
Zhang, Z., Zamojski, M., Smith, G. R., Willis, T. L., Yianni, V., Mendelev, N., Pincase, H., Seenarine, N., Amper, M. A. S., Vasoya, M., Nair, V., Turgeon, J. L., Bernard, D. J., Troyanskaya, O. G., Andoniadou, C. L., Sealfon, S. C., Ruf-Zamojski, F. M.
10.1101/2021.06.18.449034 — Posted: 2021-06-18
Intrinsic and extrinsic regulation of human fetal bone marrow haematopoiesis and perturbations in Down syndrome
Jardine, L., Webb, S., Goh, I., Quiroga Londono, M., Reynolds, G., Mather, M., Olabi, B., Stephenson, E., Botting, R. A., Horsfall, D., Engelbert, J., Maunder, D., Mende, N., Murnane, C., Dann, E., McGrath, J., King, H., Kucinski, I., Queen, R., Carey, C. D., Shrubsole, C., Poyner, E., Acres, M., Jones, C., Ness, T., Coultard, R., Elliot, N., O'Byrne, S., Haltalli, M. L., Lawrence, J. E., Lisgo, S., Balogh, P., Meyer, K. B., Prigmore, E., Ambridge, K., Sarkin Jain, M., Efremova, M., Pickard, K., Creasey, T., Bacardit, J., Henderson, D., Coxhead, J., Filby, A., Hussain, R., Dixon, D., McDonald
10.1101/2021.06.25.449771 — Posted: 2021-06-25
Single-nucleus cross-tissue molecular reference maps to decipher disease gene function
Eraslan, G., Drokhlyansky, E., Anand, S., Subramanian, A., Fiskin, E., Slyper, M., Wang, J., Van Wittenberghe, N., Rouhana, J. M., Waldman, J., Ashenberg, O., Dionne, D., Win, T. S., Cuoco, M. S., Kuksenko, O., Branton, P. A., Marshall, J. L., Greka, A., Getz, G., Segre, A. V., Aguet, F., Rozenblatt-Rosen, O., Ardlie, K. G., Regev, A.
10.1101/2021.07.19.452954 — Posted: 2021-07-19
Cross-tissue immune cell analysis reveals tissue-specific adaptations and clonal architecture across the human body
Dominguez Conde, C., Gomes, T., Jarvis, L. B., Xu, C., Howlett, S., Rainbow, D., Suchanek, O., King, H., Mamanova, L., Polanski, K., Huang, N., Fasouli, E., Mahbubani, K., Prete, M., Tuck, E., Richoz, N., Tuong, K., Campos, L., Mousa, H., Needham, E., Pritchard, S., Li, T., Elmentaite, R., Park, J., Menon, D., Bayraktar, O., James, L., Meyer, K., Clatworthy, M., Saeb-Parsy, K., Jones, J. L., Teichmann, S. A.
10.1101/2021.04.28.441762 — Posted: 2021-07-20
Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas
Borner, K., Teichmann, S. A., Quardokus, E. M., Gee, J., Browne, K., Osumi-Sutherland, D., Herr, B. W., Bueckle, A., Paul, H., Haniffa, M. A., Jardine, L., Bernard, A., Ding, S.-L., Miller, J. A., Lin, S., Halushka, M., Boppana, A., Longacre, T. A., Hickey, J., Lin, Y., Valerius, M. T., He, Y., Pryhuber, G., Sun, X., Jorgensen, M., Radtke, A., Wasserfall, C., Ginty, F., Ho, J., Sunshine, J., Beuschel, R. T., Brusko, M., Lee, S., Malhotra, R., Jain, S., Weber, G.
10.1101/2021.05.31.446440 — Posted: 2021-08-09
A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics
Burclaff, J., Bliton, R. J., Breau, K. A., Ok, M. T., Gomez-Martinez, I., Ranek, J. S., Bhatt, A. P., Purvis, J. E., Woosley, J. T., Magness, S. T.
10.1101/2021.10.05.460818 — Posted: 2021-10-06
Comprehensive identification of fetal cis-regulatory elements in the human genome by single-cell multi-omics analysis
Yu, H., Ai, N., Peng, P., Ke, Y. w., Chen, X. p., Li, Y., Zhao, T., Jiang, S., Liu, J., Jiang, L.
10.1101/2021.11.02.466852 — Posted: 2021-11-03
Robust temporal map of human in vitro myelopoiesis using single-cell genomics
Alsinet, C., Primo, M., Lorenzi, V., Knights, A. J., Sancho-Serra, C., Park, J.-E., Wyspianska, B. S., Tough, D. F., Alvarez, D., Gaffney, D. J., Vento-Tormo, R.
10.1101/2021.11.17.469005 — Posted: 2021-11-19

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