Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

184 Articles

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis
Popescu, D.-M., Botting, R. A., Stephenson, E., Green, K., Jardine, L., Calderbank, E. F., Efremova, M., Acres, M., Maunder, D., Vegh, P., Goh, I., Gitton, Y., Park, J., Polanski, K., Vento-Tormo, R., Miao, Z., Rowell, R., McDonald, D., Fletcher, J., Dixon, D., Poyner, E., Reynolds, G., Mather, M., Moldovan, C., Mamanova, L., Greig, F., Young, M. D., Meyer, K., Lisgo, S., Bacardit, J., Fuller, A., Millar, B., Innes, B., Lindsay, S., Stubbington, M. J. T., Kowalczyk, M. D., Li, B. D., Ashenbrg, O., Tabaka, M. D., Dionne, D., Tickle, T. L., Slyper, M., Rozenblatt-Rosen, O., Filby, A., Villani, A
10.1101/654210 — Posted: 2019-05-31
Rewiring of the cellular and inter-cellular landscape of the human colon during ulcerative colitis
Smillie, C. S., Biton, M., Ordovas-Montanes, J., Sullivan, K. M., Burgin, G., Graham, D. B., Herbst, R. H., Rogel, N., Slyper, M., Waldman, J., Sud, M., Andrews, E., Haber, A. L., Vickovic, S., Dionne, D., Nguyen, L. T., Villani, A. C., Hofree, M., Creasey, E. A., Huang, H., Rozenblatt-Rosen, O., Garber, J. J., Khalili, H., Desch, A. N., Daly, M. J., Ananthakrishnan, A. N., Shalek, A. K., Xavier, R. J., Regev, A.
10.1101/455451 — Posted: 2019-05-25
The Single Cell Transcriptomic Landscape of Early Human Diabetic Nephropathy
Wilson, P. C., Wu, H., Kirita, Y., Uchimura, K., Rennke, H. G., Welling, P. A., Waikar, S. S., Humphreys, B. D.
10.1101/645424 — Posted: 2019-05-24
Systematic comparative analysis of single cell RNA-sequencing methods
Ding, J., Adiconis, X., Simmons, S. K., Kowalczyk, M. S., Hession, C. C., Marjanovic, N. D., Hughes, T. K., Wadsworth, M. H., Burks, T., Nguyen, L. T., Kwon, J. Y. H., Barak, B., Ge, W., Kedaigle, A. J., Carroll, S., Li, S., Hacohen, N., Rozenblatt-Rosen, O., Shalek, A. K., Villani, A.-C., Regev, A., Levin, J. Z.
10.1101/632216 — Posted: 2019-05-23
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects
Mereu, E., Lafzi, A., Moutinho, C., Ziegenhain, C., MacCarthy, D. J., Alvarez, A., Batlle, E., Sagar, , Grün, D., Lau, J. K., Boutet, S., Sanada, C., Ooi, A., Jones, R. C., Kaihara, K., Brampton, C., Talaga, Y., Sasagawa, Y., Tanaka, K., Hayashi, T., Nikaido, I., Fischer, C., Sauer, S., Trefzer, T., Conrad, C., Adiconis, X., Nguyen, L. T., Regev, A., Levin, J. Z., Janjic, A., Wange, L. E., Bagnoli, J. W., Parekh, S., Enard, W., Gut, M., Sandberg, R., Gut, I., Stegle, O., Heyn, H.
10.1101/630087 — Posted: 2019-05-13
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation
Selewa, A., Dohn, R., Eckart, H., Lozano, S., Xie, B., Gauchat, E., Elorbany, R., Rhodes, K., Burnett, J., Gilad, Y., Pott, S., Basu, A.
10.1101/585901 — Posted: 2019-03-26
A cellular census of healthy lung and asthmatic airway wall identifies novel cell states in health and disease
Vieira Braga, F. A., Kar, G., Berg, M., Carpaij, O. A., Polanski, K., Simon, L. M., Brouwer, S., Gomes, T., Hesse, L., Jiang, J., Fasouli, E. S., Efremova, M., Vento-Tormo, R., Affleck, K., Palit, S., Strzelecka, P., Firth, H. V., Mahbubani, K. T., Cvejic, A., Meyer, K. B., Saeb-Parsy, K., Luinge, M., Brandsma, C.-A., Timens, W., Angelidis, I., Strunz, M., Koppelman, G. H., van Oosterhout, A. J., Schiller, H. B., Theis, F. J., van den Berge, M., Nawijn, M. C., Teichmann, S. A.
10.1101/527408 — Posted: 2019-01-23
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
Gaublomme, J. T., Li, B., McCabe, C., Knecht, A., Drokhlyansky, E., Van Wittenberghe, N., Waldman, J., Dionne, D., Nguyen, L., De Jager, P., Yeung, B., Zhao, X., Habib, N., Rozenblatt-Rosen, O., Regev, A.
10.1101/476036 — Posted: 2018-11-23
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics
Vento-Tormo, R., Efremova, M., Botting, R. A., Turco, M. Y., Vento-Tormo, M., Meyer, K. B., Park, J., Stephenson, E., Polanski, K., Payne, R. P., Goncalves, A., Zou, A., Henriksson, J., Wood, L., Lisgo, S., Filby, A., Wright, G. J., Stubbington, M. J., Haniffa, M., Moffett, A., Teichmann, S. A.
10.1101/429589 — Posted: 2018-09-29
Palantir characterizes cell fate continuities in human hematopoiesis
Setty, M., Kiseliovas, V., Levine, J., Gayoso, A., Mazutis, L., Pe'er, D.
10.1101/385328 — Posted: 2018-08-05

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