Channel:  Human Cell Atlas

185 Articles

Deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces
Ding, J., Regev, A.
10.1101/853457 — Posted: 2019-11-25
High throughput, error corrected Nanopore single cell transcriptome sequencing
Lebrigand, K., Magnone, V., BARBRY, P., Waldmann, R.
10.1101/831495 — Posted: 2019-11-05
Single Cell RNA-seq reveals ectopic and aberrant lung resident cell populations in Idiopathic Pulmonary Fibrosis
Adams, T. S., Schupp, J. C., Poli, S., Ayaub, E. A., Neumark, N., Ahangari, F., Chu, S. G., Raby, B. A., DeIuliis, G., Januszyk, M., Duan, Q., Arnett, H. A., Siddiqui, A., Washko, G. R., Homer, R., Yan, X., Rosas, I. O., Kaminski, N.
10.1101/759902 — Posted: 2019-10-18
Single cell transcriptomics of human epidermis reveals basal stem cell transition states
Wang, S., Drummond, M. L., Guerrero-Juarez, C. F., Tarapore, E., MacLean, A. L., Stabell, A. R., Wu, S. C., Gutierrez, G., That, B. T., Benavente, C. A., Nie, Q., Atwood, S. X.
10.1101/784579 — Posted: 2019-09-30
Resolving the fibrotic niche of human liver cirrhosis using single-cell transcriptomics
Ramachandran, P., Dobie, R., Wilson-Kanamori, J. R., Dora, E. F., Henderson, B. E., Taylor, R. S., Matchett, K. P., Portman, J. R., Efremova, M., Vento-Tormo, R., Luu, N. T., Weston, C. J., Newsome, P. N., Harrison, E. M., Mole, D. J., Wigmore, S. J., Iredale, J. P., Tacke, F., Pollard, J. W., Ponting, C. P., Marioni, J., Teichmann, S. A., Henderson, N. C.
10.1101/766113 — Posted: 2019-09-12
The enteric nervous system of the human and mouse colon at a single-cell resolution
Drokhlyansky, E., Smillie, C. S., Van Wittenberghe, N., Ericsson, M., Griffin, G. K., Dionne, D., Cuoco, M. S., Goder-Reiser, M. N., Sharova, T., Aguirre, A. J., Boland, G. M., Graham, D., Rozenblatt-Rosen, O., Xavier, R. J., Regev, A.
10.1101/746743 — Posted: 2019-09-04
Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders
Lukassen, S., Ten, F. W., Eils, R., Conrad, C.
10.1101/740415 — Posted: 2019-09-02
Lung, spleen and oesophagus tissue remains stable for scRNAseq in cold preservation
Madissoon, E., Wilbrey-Clark, A. L., Miragaia, R. J., Saeb-Parsy, K., Mahbubani, K. T., Georgakopoulos, N., Harding, P., Polanski, K., Nowicki-Osuch, K., Fitzgerald, R. C., Loudon, K. W., Ferdinand, J. R., Clatworthy, M. R., Tsingene, A., van Dongen, S., Dabrowska, M., Patel, M., Stubbington, M. J., Teichmann, S., Stegle, O., Meyer, K. B.
10.1101/741405 — Posted: 2019-08-31
Generation of human neural retina transcriptome atlas by single cell RNA sequencing
Lukowski, S., Lo, C., Sharov, A., Nguyen, Q., Fang, L., Hung, S., Zhu, L., Zhang, T., Nguyen, T., Senabouth, A., Jabbari, J., Welby, E., Sowden, J., Waugh, H., Mackey, A., Pollock, G., Lamb, T., Wang, P.-Y., Hewitt, A., Gillies, M., Powell, J., Wong, R.
10.1101/425223 — Posted: 2019-08-03
Single cell transcriptome atlas of immune cells in human small intestine and in celiac disease
Stunnenberg, H., Atlasy, N., Bujko, A., Brazda, P. B., Janssen-Megens, E., Bakkenvold, E. S., Jahnsen, J., Jahsen, F.
10.1101/721258 — Posted: 2019-08-01

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