Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

156 Articles

Cellular heterogeneity and dynamics of the human uterus in healthy premenopausal women
Ulrich, N. D., Vargo, A. H., Ma, Q., Shen, Y.-C., Hannum, D. F., Gurczynski, S. J., Moore, B. B., Schon, S., Lieberman, R., Shikanov, A., Marsh, E. E., Fazleabas, A. T., Li, J. Z., Hammoud, S. S.
10.1101/2024.03.07.583985 — Posted: 2024-03-12
Harnessing Agent-Based Modeling in CellAgentChat to Unravel Cell-Cell Interactions from Single-Cell Data
Raghavan, V., Li, Y., Ding, J.
10.1101/2023.08.23.554489 — Posted: 2024-03-25
Spatial landmark detection and tissue registration with deep learning
Ekvall, M. N., Bergenstrahle, L., Andersson, A., Olegard, J., Czarnewski, P., Kall, L., Lundeberg, J.
10.1101/2023.08.24.554614 — Posted: 2023-08-26
Building a learnable universal coordinate system for single-cell atlas with a joint-VAE model
Gao, H., Hua, K., Wei, L., Wu, X., Chen, S., Yin, Q., Jiang, R., Zhang, X.
10.1101/2021.09.09.459281 — Posted: 2023-07-30
STEM: A Method for Mapping Single-cell and Spatial Transcriptomics Data with Transfer Learning
Hao, M., Luo, E., Chen, Y., Wu, Y., Li, C., Chen, S., Gao, H., Bian, H., Wei, L., Zhang, X.
10.1101/2022.09.23.509186 — Posted: 2023-05-30
High-parametric protein maps reveal the spatial organization in early-developing human lung
Sariyar, S., Sountoulidis, A., Hansen, J. N., Salas, S. M., Mardamshina, M., Martinez Sacals, A., Ballllosera Navarro, F., Andrusivova, Z., Li, X., Czarnewski, P., Lundeberg, J., Linnarsson, S., Nilsson, M., Sundstrom, E., Samakovlis, C., Lundberg, E., Ayoglu, B.
10.1101/2024.01.25.577163 — Posted: 2024-01-25
An integrated transcriptomic cell atlas of human neural organoids
He, Z., Dony, L., Fleck, J. S., Szalata, A., Li, K. X., Sliskovic, I., Lin, H.-C., Santel, M., Atamian, A., Quadrato, G., Sun, J., Pasca, S. P., Camp, G., Theis, F., Treutlein, B.
10.1101/2023.10.05.561097 — Posted: 2023-10-06
Single nuclei chromatin accessibility and transcriptomic map of breast tissues of women of diverse genetic ancestry
Bhat-Nakshatri, P., Gao, H., Khatpe, A. S., McGuire, P. C., Erdogan, C., Chen, D., Jiang, G., New, F., German, R., Storniolo, A. M., Liu, Y., Nakshatri, H.
10.1101/2023.10.04.560911 — Posted: 2023-10-06
Quantifying Adaptive Evolution of the Human Immune Cell Landscape
Salvador-Martinez, I., Murga-Moreno, J., Nieto, J. C., Alsinet, C., Enard, D., Heyn, H.
10.1101/2023.10.06.559946 — Posted: 2023-10-06
An integrated transcriptomic cell atlas of human endoderm-derived organoids
Xu, Q., Halle, L., Hediyeh-zadeh, S., Kuijs, M., Kilik, U., Yu, Q., Frum, T., Adam, L., Parikh, S., Gander, M., Kfuri-Rubens, R., Klein, D., He, Z., Fleck, J. S., Oost, K., Kahnwald, M., Barbiero, S., Mitrofanova, O., Maciag, G., Jensen, K. B., Lutolf, M., Liberali, P., Beumer, J., Spence, J. R., Treutlein, B., Theis, F. J., Camp, J. G.
10.1101/2023.11.20.567825 — Posted: 2023-12-04

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