Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2333 Articles

WASP: allele-specific software for robust discovery of molecular quantitative trait loci

Bryce van de Geijn, Graham McVicker, Yoav Gilad, Jonathan Pritchard

10.1101/011221 — Posted: 2014-11-07

Disentangling effects of colocalizing genomic annotations to functionally prioritize non-coding variants within complex trait loci

Gosia Trynka, Harm-Jan Westra, Kamil Slowikowski, Xinli Hu, Han Xu, Barbara E Stranger, Buhm Han, Soumya Raychaudhuri

10.1101/009258 — Posted: 2014-09-18

Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage

Joerg Hagmann, Claude Becker, Jonas Müller, Oliver Stegle, Rhonda C Meyer, Korbinian Schneeberger, Joffrey Fitz, Thomas Altmann, Joy Bergelson, Karsten Borgwardt, Detlef Weigel

10.1101/009225 — Posted: 2014-09-16

Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics

Irene Gallego Romero, Bryan J Pavlovic, Irene Hernando-Herraez, Nicholas E Banovich, Courtney L Kagan, Jonathan E Burnett, Constance H Huang, Amy Mitrano, Claudia I Chavarria, Inbar F Ben-Nun, Yingchun Li, Karen Sabatini, Trevor R Leonardo, Mana Parast, Tomas Marques-Bonet, Louise C Laurent, Jeanne F Loring, Yoav Gilad

10.1101/008862 — Posted: 2014-09-08

The Genetic Architecture of Gene Expression Levels in Wild Baboons

Jenny Tung, Xiang Zhou, Susan C Alberts, Matthew Stephens, Yoav Gilad

10.1101/008490 — Posted: 2014-08-28

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.

Nicholas E Banovich, Xun Lan, Graham McVicker, Bryce Van de Geijn, Jacob F Degner, John D. Blischak, Julien Roux, Jonathan K. Pritchard, Yoav Gilad

10.1101/006171 — Posted: 2014-08-12

Efficient site-specific editing of the C. elegans genome

Donglei Zhang, Michael Glotzer

10.1101/007344 — Posted: 2014-07-31

Power analysis of artificial selection experiments using efficient whole genome simulation of quantitative traits

Darren Kessner, John Novembre

10.1101/005892 — Posted: 2014-06-04

Spatial localization of recent ancestors for admixed individuals

Wen-Yun Yang, Alexander Platt, Charleston Wen-Kai Chiang, Eleazar Eskin, John Novembre, Bogdan Pasaniuc

10.1101/004713 — Posted: 2014-05-04

Ancient human genomes suggest three ancestral populations for present-day Europeans

Iosif Lazaridis, Nick Patterson, Alissa Mittnik, Gabriel Renaud, Swapan Mallick, Karola Kirsanow, Peter H. Sudmant, Joshua G. Schraiber, Sergi Castellano, Mark Lipson, Bonnie Berger, Christos Economou, Ruth Bollongino, Qiaomei Fu, Kirsten Bos, Susanne Nordenfelt, Heng Li, Cesare de Filippo, Kay Prüfer, Susanna Sawyer, Cosimo Posth, Wolfgang Haak, Fredrik Hallgren, Elin Fornander, Nadin Rohland, Dominique Delsate, Michael Francken, Jean-Michel Guinet, Joachim Wahl, George Ayodo, Hamza A. Babiker, Graciela Baillet, Elena Balanovska, Oleg Balanovsky, Ramiro Barrantes, Gabriel Bedoya, Haim Ben-Ami, Judit Bene, Fouad Berrada, Claudio M.

10.1101/001552 — Posted: 2014-04-05

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