Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2395 Articles

The DOE Systems Biology Knowledgebase (KBase)

Arkin, A. P., Stevens, R. L., Cottingham, R. W., Maslov, S., Henry, C. S., Dehal, P., Ware, D., Perez, F., Harris, N. L., Canon, S., Sneddon, M. W., Henderson, M. L., Riehl, W. J., Gunter, D., Murphy-Olson, D., Chan, S., Kamimura, R. T., Brettin, T. S., Meyer, F., Chivian, D., Weston, D. J., Glass, E. M., Davison, B. H., Kumari, S., Allen, B. H., Baumohl, J., Best, A. A., Bowen, B., Brenner, S. E., Bun, C. C., Chandonia, J.-M., Chia, J.-M., Colasanti, R., Conrad, N., Davis, J. J., DeJongh, M., Devoid, S., Dietrich, E., Drake, M. M., Dubchak, I., Edirisinghe, J. N., Fang, G., Faria, J. P., Fryb

10.1101/096354 — Posted: 2016-12-22

Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity

Lindo, J., Achilli, A., Perego, U., Archer, D., Valdiosera, C., Petzelt, B., Mitchell, J., Worl, R., Dixon, E. J., Fifield, T., Rasmussen, M., Willerslev, E., Cybulski, J., Kemp, B., DeGiorgio, M., Malhi, R. S.

10.1101/093468 — Posted: 2016-12-15

Co-occurring eQTLs and mQTLs: detecting shared causal variants and shared biological mechanisms

Pierce, B., Tong, L., Argos, M., Jasmine, F., Rakibuz-Zaman, M., Sarwar, G., Islam, M. T., Shahriar, H., Islam, T., Rahman, M., Yunus, M., Kibriya, M. G., Chen, L. S., Ahsan, H.

10.1101/094656 — Posted: 2016-12-15

Fitness landscapes reveal simple strategies for steering evolution to minimize antibiotic resistance

Smith, M., Cobey, S.

10.1101/093153 — Posted: 2016-12-11

Population history of the Sardinian people inferred from whole-genome sequencing

Chiang, C. W. K., Marcus, J. H., Sidore, C., Al-Asadi, H., Zoledziewska, M., Pitzalis, M., Busonero, F., Maschio, A., Pistis, G., Steri, M., Angius, A., Lohmueller, K. E., Abecasis, G. R., Schlessinger, D., Cucca, F., Novembre, J.

10.1101/092148 — Posted: 2016-12-07

Visualizing the Structure of RNA-seq Expression Data usingGrade of Membership Models

Dey, K. K., Hsiao, C. J., Stephens, M.

10.1101/051631 — Posted: 2016-12-06

Impact of regulatory variation across human iPSCs and differentiated cells

Banovich, N. E., Li, Y. I., Raj, A., Ward, M. C., Greenside, P., Calderon, D., Tung, P. Y., Burnett, J. E., Myrthil, M., Thomas, S. M., Burrows, C. K., Gallego Romero, I., Pavlovic, B. J., Kundaje, A., Pritchard, J. K., Gilad, Y.

10.1101/091660 — Posted: 2016-12-05

High-resolution tracking of microbial colonization in Fecal Microbiota Transplantation experiments via metagenome-assembled genomes

Lee, S. T., Kahn, S. A., Delmont, T. O., Hubert, N. A., Morrison, H. G., Antonopoulos, D. A., Rubin, D. T., Eren, A. M.

10.1101/090993 — Posted: 2016-12-02

Bayesian large-scale multiple regression with summary statistics from genome-wide association studies

Zhu, X., Stephens, M.

10.1101/042457 — Posted: 2016-12-01

Eco-evolutionary theory and insect outbreaks

Paez, D., Dukic, V., Dushoff, J., Fleming-Davies, A., Dwyer, G.

10.1101/088047 — Posted: 2016-11-16

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