Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2327 Articles

SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in Warblers

Natasha Bloch, James M Morrow, Belinda SW Chang, Trevor D Price

10.1101/013573 — Posted: 2015-01-09

Accounting for experimental noise reveals that mRNA levels, amplified by post-transcriptional processes, largely determine steady-state protein levels in yeast

Gábor Csárdi, Alexander Franks, David S. Choi, Eduardo M. Airoldi, D. Allan Drummond

10.1101/009472 — Posted: 2014-12-26

msCentipede: Modeling heterogeneity across genomic sites improves accuracy in the inference of transcription factor binding

Anil Raj, Heejung Shim, Yoav Gilad, Jonathan K Pritchard, Matthew Stephens

10.1101/012013 — Posted: 2014-11-29

A multivariate genome-wide association analysis of 10 LDL subfractions, and their response to statin treatment, in 1868 Caucasians

Heejung Shim, Daniel I Chasman, Joshua D Smith, Samia Mora, Paul M Ridker, Deborah A Nickerson, Ronald M Krauss, Matthew Stephens

10.1101/011270 — Posted: 2014-11-09

WASP: allele-specific software for robust discovery of molecular quantitative trait loci

Bryce van de Geijn, Graham McVicker, Yoav Gilad, Jonathan Pritchard

10.1101/011221 — Posted: 2014-11-07

Disentangling effects of colocalizing genomic annotations to functionally prioritize non-coding variants within complex trait loci

Gosia Trynka, Harm-Jan Westra, Kamil Slowikowski, Xinli Hu, Han Xu, Barbara E Stranger, Buhm Han, Soumya Raychaudhuri

10.1101/009258 — Posted: 2014-09-18

Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage

Joerg Hagmann, Claude Becker, Jonas Müller, Oliver Stegle, Rhonda C Meyer, Korbinian Schneeberger, Joffrey Fitz, Thomas Altmann, Joy Bergelson, Karsten Borgwardt, Detlef Weigel

10.1101/009225 — Posted: 2014-09-16

Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics

Irene Gallego Romero, Bryan J Pavlovic, Irene Hernando-Herraez, Nicholas E Banovich, Courtney L Kagan, Jonathan E Burnett, Constance H Huang, Amy Mitrano, Claudia I Chavarria, Inbar F Ben-Nun, Yingchun Li, Karen Sabatini, Trevor R Leonardo, Mana Parast, Tomas Marques-Bonet, Louise C Laurent, Jeanne F Loring, Yoav Gilad

10.1101/008862 — Posted: 2014-09-08

The Genetic Architecture of Gene Expression Levels in Wild Baboons

Jenny Tung, Xiang Zhou, Susan C Alberts, Matthew Stephens, Yoav Gilad

10.1101/008490 — Posted: 2014-08-28

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.

Nicholas E Banovich, Xun Lan, Graham McVicker, Bryce Van de Geijn, Jacob F Degner, John D. Blischak, Julien Roux, Jonathan K. Pritchard, Yoav Gilad

10.1101/006171 — Posted: 2014-08-12

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