Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3988 Articles

Molecular mechanisms of substrate-controlled ring dynamics and sub-stepping in a nucleic-acid dependent hexameric motor

Nathan D. Thomsen, Michael R. Lawson, Lea B. Witkowsky, Song Qu, James M. Berger

10.1101/069559 — Posted: 2016-08-16

Ligand-induced and small molecule control of substrate loading in a hexameric helicase

Michael R. Lawson, Kevin Dyer, James M. Berger

10.1101/069773 — Posted: 2016-08-16

A Systems-Level Model Reveals That 1,2-Propanediol Utilization Microcompartments Enhance Pathway Flux Through Intermediate Sequestration.

Christopher M Jakobson, Marilyn F. Slininger, Danielle Tullman-Ercek, Niall M. Mangan

10.1101/069542 — Posted: 2016-08-14

RNase H enables efficient repair of R-loop induced DNA damage

Jeremy D. Amon, Douglas Koshland

10.1101/068742 — Posted: 2016-08-09

How the AFF1/4 scaffold recruits the elongation factor ELL2 to promote HIV-1 proviral transcription

Shiqian Qi, Zichong Li, Ursula Schulze-Gahmen, Goran Stjepanovic, Qiang Zhou, James Hurley

10.1101/068262 — Posted: 2016-08-06

A Dynamic Mode of Mitotic Bookmarking by Transcription Factors

Sheila S Teves, Luye An, Anders S Hansen, Liangqi Xie, Xavier Darzacq, Robert Tjian

10.1101/066464 — Posted: 2016-08-01

A rodent model of social rejection

Haozhe Shan, Inbal Ben-Ami Bartal, Peggy Mason

10.1101/066993 — Posted: 2016-07-31

An introduction to linear stability analysis for deciphering spatial patterns in signaling networks

Jasmine Nirody, Padmini Rangamani

10.1101/065474 — Posted: 2016-07-23

CRISPR-Cas9 mediated mutagenesis of a DMR6 ortholog in tomato confers broad-spectrum disease resistance

Daniela Paula de Toledo Thomazella, Quinton Brail, Douglas Dahlbeck, Brian J Staskawicz

10.1101/064824 — Posted: 2016-07-23

Prober: A general toolkit for analyzing sequencing-based ‘toeprinting’ assays

Bo Li, Akshay Tambe, Sharon Aviran, Lior Pachter

10.1101/063107 — Posted: 2016-07-12

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