Channel:  University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3883 Articles

Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping
Sean Ruddy, Marla Johnson, Elizabeth Purdom
10.1101/012823 — Posted: 2015-06-22
TESS: Bayesian inference of lineage diversification rates from (incompletely sampled) molecular phylogenies in R
Sebastian Höhna, Michael R. May, Brian R. Moore
10.1101/021238 — Posted: 2015-06-19
A Bayesian Approach for Detecting Mass-Extinction Events When Rates of Lineage Diversification Vary
Michael R. May, Sebastian Höhna, Brian R. Moore
10.1101/020149 — Posted: 2015-06-02
Phylogenetic ANOVA: The Expression Variance and Evolution (EVE) model for quantitative trait evolution
Rori Rohlfs, Rasmus Nielsen
10.1101/004374 — Posted: 2015-06-02
Ancestral chromatin configuration constrains chromatin evolution on differentiating sex chromosomes in Drosophila
Qi Zhou, Doris Bachtrog
10.1101/019786 — Posted: 2015-05-24
Molecular Fossils from Microorganisms Preserved in Glacial Ice
P. Buford Price, J. Jeffrey Morris, Ryan C. Bay, Ajeeth Adhikari, Stephen J. Giovannoni, Kevin L. Vergin
10.1101/019240 — Posted: 2015-05-13
Sequencing of 15,622 gene-bearing BACs reveals new features of the barley genome
María Muñoz-Amatriaín, Stefano Lonardi, MingCheng Luo, Kavitha Madishetty, Jan Svensson, Matthew Moscou, Steve Wanamaker, Tao Jiang, Andris Kleinhofs, Gary Muehlbauer, Roger Wise, Nils Stein, Yaqin Ma, Edmundo Rodriguez, Dave Kudrna, Prasanna R Bhat, Shiaoman Chao, Pascal Condamine, Shane Heinen, Josh Resnik, Rod Wing, Heather N Witt, Matthew Alpert, Marco Beccuti, Serdar Bozdag, Francesca Cordero, Hamid Mirebrahim, Rachid Ounit, Yonghui Wu, Frank You, Jie Zheng, Hana Šimková, Jaroslav Doležel, Jane Grimwood, Jeremy Schmutz, Denisa Duma, Lothar Altschmied, Tom Blake, Phil Bregitzer, Laurel Cooper, Muharrem Dilbirligi, Anders Falk, Lei
10.1101/018978 — Posted: 2015-05-05
Detecting recent selective sweeps while controlling for mutation rate and background selection
Christian D. Huber, Michael DeGiorgio, Ines Hellmann, Rasmus Nielsen
10.1101/018697 — Posted: 2015-04-30
FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads
Ka Kit Lam, Kurt LaButti, Asif Khalak, David Tse
10.1101/010215 — Posted: 2015-04-04
Optimal Haplotype Assembly from High-Throughput Mate-Pair Reads
Govinda M Kamath, Eren Şaşoğlu, David Tse
10.1101/014993 — Posted: 2015-02-07

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