Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3941 Articles

The origin and evolution of maize in the American Southwest

Rute R da Fonseca, Bruce D Smith, Nathan Wales, Enrico Cappellini, Pontus Skoglund, Matteo Fumagalli, José Alfredo Samaniego, Christian Carøe, María C Ávila-Arcos, David E Hufnagel, Thorfinn Sand Korneliussen, Filipe Garrett Vieira, Mattias Jakobsson, Bernardo Arriaza, Eske Willerslev, Rasmus Nielsen, Matthew B Hufford, Anders Albrechtsen, Jeffrey Ross-Ibarra, M Thomas P Gilbert

10.1101/013540 — Posted: 2015-01-11

Reticulate speciation and adaptive introgression in the Anopheles gambiae species complex

Jacob Crawford, Michelle M. Riehle, Wamdaogo M. Guelbeogo, Awa Gneme, N'fale Sagnon, Kenneth D. Vernick, Rasmus Nielsen, Brian P. Lazzaro

10.1101/009837 — Posted: 2014-12-09

A Hidden Markov Model for Investigating Recent Positive Selection through Haplotype Structure

Hua Chen, Jody Hey, Montgomery Slatkin

10.1101/011247 — Posted: 2014-11-08

A 22,403 marker composite genetic linkage map for cassava (Manihot esculenta Crantz) derived from ten populations

International Cassava Genetic Map Consortium

10.1101/010637 — Posted: 2014-10-24

The projection of a test genome onto a reference population and applications to humans and archaic hominins

Melinda A Yang, Kelley Harris, Montgomery Slatkin

10.1101/008805 — Posted: 2014-10-08

Shifts in stability and control effectiveness during evolution of Paraves support aerial maneuvering hypotheses for flight origins

Dennis Evangelista, Sharlene Cam, Tony Huynh, Austin Kwong, Homayun Mehrabani, Kyle Tse, Robert Dudley

10.1101/001750 — Posted: 2014-10-03

Fitting the Balding-Nichols model to forensic databases

Rori Rohlfs, Vitor R.C. Aguiar, Kirk E. Lohmueller, Amanda M. Castro, Alessandro C.S. Ferreira, Vanessa C.O. Almeida, Iuri D. Louro, Rasmus Nielsen

10.1101/009969 — Posted: 2014-10-03

Characterization of the transcriptome, nucleotide sequence polymorphism, and natural selection in the desert adapted mouse Peromyscus eremicus

Matthew D MacManes, Michael B Eisen

10.1101/009134 — Posted: 2014-09-29

Sensitivity of quantitative traits to mutational effects, number of loci, and population history

Joshua G. Schraiber, Michael J. Landis

10.1101/008540 — Posted: 2014-09-04

diCal-IBD: demography-aware inference of identity-by-descent tracts in unrelated individuals

Paula Tataru, Jasmine A. Nirody, Yun S. Song

10.1101/005082 — Posted: 2014-09-03

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