bioRxiv/medRxiv TRiP Review Activity

416 Reviews — All Partners — Genomics

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AIVE: accurate predictions of SARS-CoV-2 infectivity from comprehensive analysis
Park, J., Choi, W., Seong, D. Y., Jeong, S., Lee, J. Y., Park, H. J., Chung, D. S., Yi, K., Kim, U., Yoon, G.-Y., Kim, H., Kim, T., Ko, S., Min, E. J., Cho, H.-S., Cho, N.-H., Hong, D.
10.1101/2024.06.14.598983 — Posted: 2024-06-14 — Discussion: 2024-12-04  eLife
Xist RNA binds select autosomal genes and depends on Repeat B to regulate their expression
Yao, S., Jeon, Y., Kesner, B., Lee, J. T.
10.1101/2024.07.23.604772 — Posted: 2024-07-23 — Discussion: 2024-12-04  eLife
Factors influencing the accuracy in dating single gene trees
Louvel, G., Roest Crollius, H.
10.1101/2020.08.24.264671 — Posted: 2020-08-24 — Discussion: 2024-11-28  Peer Community In
Human cytomegalovirus extensively re-organizes the human genome, diminishing TEAD1 transcription factor activity
Sayeed, K., Parameswaran, S., Beucler, M. J., Edsall, L. E., VonHandorf, A., Crowther, A., Donmez, O. A., Hass, M. R., Richards, S., Forney, C. R., Wright, J., Leong, M. M., Murray-Nerger, L. A., Gewurz, B. E., Kaufman, K. M., Harley, J. B., Zhao, B., Miller, W. E., Kottyan, L. C., Weirauch, M. T.
10.1101/2024.04.12.588762 — Posted: 2024-04-13 — Discussion: 2024-11-27  eLife
DNA methylation insulates genic regions from CTCF loops near nuclear speckles
Roseman, S. A., Siegenfeld, A. P., Lee, C., Lue, N. Z., Waterbury, A. L., Liau, B. B.
10.1101/2023.07.26.550645 — Posted: 2023-07-26 — Discussion: 2024-11-27  eLife
Re-annotation of SARS-CoV-2 proteins using an HHpred-based approach opens new opportunities for a better understanding of this virus
Brezellec, P.
10.1101/2023.06.06.543855 — Posted: 2023-06-07 — Discussion: 2024-11-13  Peer Community In
A genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model
Golov, A. K., Gavrilov, A. A., Kaplan, N., Razin, S. V.
10.1101/2023.02.12.528105 — Posted: 2023-02-13 — Discussion: 2024-10-30  eLife
De Novo Genome assembly of the Caucasian dwarf goby Knipowitschia cf. caucasica, a new alien Gobiidae invadingthe River Rhine
Schoenle, A., Guiglielmoni, N., Mainz, T., Greve, C., Hamadou, A. B., Heermann, L., Borcherding, J., Waldvogel, A.-M.
10.1101/2024.04.22.590508 — Posted: 2024-04-26 — Discussion: 2024-10-22  Peer Community In
Limited evidence of tumour mutational burden as a biomarker of response to immunotherapy
Gurjao, C., Tsukrov, D., Imakaev, M., Luquette, L. J., Mirny, L. A.
10.1101/2020.09.03.260265 — Posted: 2020-09-04 — Discussion: 2024-10-14  eLife
Increased inflammatory signature in myeloid cells of non-small cell lung cancer patients with high clonal hematopoiesis burden
Sim, H., Park, H. J., Park, G.-H., Kim, Y. J., Park, W.-Y., Lee, S.-H., Choi, M.
10.1101/2024.01.02.573827 — Posted: 2024-01-02 — Discussion: 2024-10-10  eLife

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