bioRxiv/medRxiv TRiP Review Activity

450 Reviews — All Partners — Genomics

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Integrating bulk and single cell RNA-seq refines transcriptomic profiles of individual C. elegans neurons
Barrett, A., Varol, E., Weinreb, A., Taylor, S. R., McWhirter, R., Cros, C., Vidal, B., Basavaraju, M., Poff, A., Tipps, J. A., Majeed, M., Wang, C., Bayer, E. A., Reilly, M., Yemini, E., Sun, H., Hobert, O., Miller, D. M., Hammarlund, M.
10.1101/2022.04.05.487209 — Posted: 2025-10-20 — Discussion: 2025-04-11  eLife
Single-cell RNA-seq reveals trans-sialidase-like superfamily gene expression heterogeneity in Trypanosoma cruzi populations
Inchausti, L., Bilbao, L., Campo, V. A., Garat, J., Sotelo-Silveira, J., Rinaldi, G., Howick, V. M., Duhagon, M. A., G. De Gaudenzi, J., Smircich, P.
10.1101/2025.01.14.633000 — Posted: 2025-01-16 — Discussion: 2025-04-02  eLife
Pyruvate and Related Energetic Metabolites Modulate Resilience Against High Genetic Risk for Glaucoma
Li, K., Tolman, N., V. Segre, A., Stuart, K., Zeleznik, O. A., Vallabh, N. A., Hu, K., Zebardast, N., Hanyuda, A., Raita, Y., Montgomery, C., Zhang, C., Hysi, P. G., Do, R., Khawaja, A., Wiggs, J., Kang, J., John, S., Pasquale, L.
10.1101/2025.01.18.633745 — Posted: 2025-01-22 — Discussion: 2025-03-28  eLife
Hypoxia impedes differentiation of cranial neural crest cells into derivatives relevant for craniofacial development
Schmid, T., Rodrian, G., Kohler, A., Wegner, M., Goelz, L., Weider, M.
10.1101/2024.09.10.610634 — Posted: 2024-09-11 — Discussion: 2025-03-27  Review Commons
Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function
Gholamalamdari, O., van Schaik, T., Wang, Y., Kumar, P., Zhang, L., Zhang, Y., Gonzalez, G. A. H., Vouzas, A. E., Zhao, P. A., Gilbert, D. M., Ma, J., van Steensel, B., Belmont, A. S.
10.1101/2024.04.23.590809 — Posted: 2024-04-23 — Discussion: 2025-03-25  eLife
Still waters run deep: Large scale genome rearrangements in the evolution of morphologically conservative Polyplacophora
Sigwart, J. D., Li, Y., Chen, Z., Voncina, K., Sun, J.
10.1101/2024.06.13.598811 — Posted: 2024-06-16 — Discussion: 2025-03-24  eLife
Draft Genome of the Endangered Visayan Spotted Deer (Rusa alfredi)
Javier, M. C. F., Noblezada, A. C., Sienes, P. M. Q., Guino-o, R. S., Palomar-Abesamis, N., Malay, M. C. D., del Castillo, C. S., Ferriols, V. M. E. N.
10.1101/2025.02.05.636739 — Posted: 2025-02-06 — Discussion: 2025-03-17  Gigabyte
The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
Ritter, E. J., Cochetel, N., Minio, A., Cousins, P., Cantu, D. J., Niederhuth, C.
10.1101/2024.05.03.592245 — Posted: 2024-05-05 — Discussion: 2025-03-17  Gigabyte
Dimeric R25CPTH(1-34) Activates the Parathyroid Hormone-1 Receptor in vitro and Stimulates Bone Formation in Osteoporotic Female Mice
Noh, M., Che, X., Jin, X., Lee, D.-K., Kim, H.-J., Park, D. R., Lee, S. Y., Lee, H., Gardella, T. J., Choi, J.-Y., Lee, S.
10.1101/2024.03.13.584815 — Posted: 2024-03-14 — Discussion: 2025-03-14  eLife
Tradeoffs in Modeling Context Dependency in Complex Trait Genetics
Weine, E., Smith, S. P., Knowlton, R. K., Harpak, A.
10.1101/2023.06.21.545998 — Posted: 2023-06-23 — Discussion: 2025-03-12  eLife

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