bioRxiv/medRxiv TRiP Review Activity

454 Reviews — All Partners — Genomics

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Natural variation in chalcone isomerase defines a major locus controlling growth variation between Populus nigra populations
Durufle, H., Dejardin, A., Jorge, V., Pegard, M., Pilate, G., Rogier, O., Sanchez, L., Segura, V.
10.1101/2024.10.21.618920 — Posted: 2024-10-24 — Discussion: 2025-04-30  Peer Community In
Efficiently Constructing Complete Genomes with CycloneSEQ to Fill Gaps in Bacterial Draft Assemblies
Liang, H., Wang, M., Hu, T., Wang, H., He, W., Ju, Y., Guo, R., Chen, J., Guo, F., Zeng, T., Dong, Y., Wang, B., Liu, C., Jin, X., Zhang, W., Zou, Y., Xu, X., Xiao, L.
10.1101/2024.09.05.611410 — Posted: 2024-09-07 — Discussion: 2025-04-28  Gigabyte
Convergent evolution of epigenome recruited DNA repair across the Tree of Life
Monroe, G., Lee, C., Quiroz, D. P., Lensink, M., Oya, S., Davis, M., Long, E., Bird, K. A., Pierce, A. V., Zhao, K., Runcie, D. E.
10.1101/2024.10.15.618488 — Posted: 2024-11-02 — Discussion: 2025-04-17  eLife
DNMT1 loss leads to hypermethylation of a subset of late replicating domains by DNMT3A
Kafetzopoulos, I., Taglini, F., Davidson-Smith, H., Sproul, D.
10.1101/2024.12.19.629414 — Posted: 2024-12-19 — Discussion: 2025-04-14  Review Commons
Genome assembly and annotation of Acropora pulchra from Mo'orea French Polynesia
Conn, T., Ashey, J., Cunning, R., Putnam, H. M.
10.1101/2025.03.27.645822 — Posted: 2025-03-28 — Discussion: 2025-04-13  Gigabyte
Single-cell RNA-seq reveals trans-sialidase-like superfamily gene expression heterogeneity in Trypanosoma cruzi populations
Inchausti, L., Bilbao, L., Campo, V. A., Garat, J., Sotelo-Silveira, J., Rinaldi, G., Howick, V. M., Duhagon, M. A., G. De Gaudenzi, J., Smircich, P.
10.1101/2025.01.14.633000 — Posted: 2025-01-16 — Discussion: 2025-04-02  eLife
Pyruvate and Related Energetic Metabolites Modulate Resilience Against High Genetic Risk for Glaucoma
Li, K., Tolman, N., V. Segre, A., Stuart, K., Zeleznik, O. A., Vallabh, N. A., Hu, K., Zebardast, N., Hanyuda, A., Raita, Y., Montgomery, C., Zhang, C., Hysi, P. G., Do, R., Khawaja, A., Wiggs, J., Kang, J., John, S., Pasquale, L.
10.1101/2025.01.18.633745 — Posted: 2025-01-22 — Discussion: 2025-03-28  eLife
Hypoxia impedes differentiation of cranial neural crest cells into derivatives relevant for craniofacial development
Schmid, T., Rodrian, G., Kohler, A., Wegner, M., Goelz, L., Weider, M.
10.1101/2024.09.10.610634 — Posted: 2024-09-11 — Discussion: 2025-03-27  Review Commons
Beyond A and B Compartments: how major nuclear locales define nuclear genome organization and function
Gholamalamdari, O., van Schaik, T., Wang, Y., Kumar, P., Zhang, L., Zhang, Y., Gonzalez, G. A. H., Vouzas, A. E., Zhao, P. A., Gilbert, D. M., Ma, J., van Steensel, B., Belmont, A. S.
10.1101/2024.04.23.590809 — Posted: 2024-04-23 — Discussion: 2025-03-25  eLife
Still waters run deep: Large scale genome rearrangements in the evolution of morphologically conservative Polyplacophora
Sigwart, J. D., Li, Y., Chen, Z., Voncina, K., Sun, J.
10.1101/2024.06.13.598811 — Posted: 2024-06-16 — Discussion: 2025-03-24  eLife

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