bioRxiv/medRxiv TRiP Review Activity

30 Reviews — Gigabyte — Bioinformatics

Most recent first Previous | Page 3: Articles 21-29

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri

Shippy, T., Miller, S., Tamayo, B., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., D'Elia, T., Saha, S.

10.1101/2021.10.30.466601 — Posted: 2021-11-02 — Discussion: 2022-05-31 Gigabyte

Annotation of Putative Circadian Rhythm-Associated Genes in Diaphorina citri (Hemiptera : Liviidae)

Reynolds, M., de Oliveira, L., Paris, T., Vosburg, C., Massimino, C., Norus, J., Ortiz, Y., Espino, M., Davis, N., Masse, R., Neiman, A., Holcomb, R., Gervais, K., Kemp, M., Hoang, M., Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.

10.1101/2021.10.09.463768 — Posted: 2021-10-10 — Discussion: 2022-05-31 Gigabyte

Annotation of Hox cluster and Hox cofactor genes in the Asian citrus psyllid, Diaphorina citri, reveals novel features

Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., DeliaFIXX, T., Saha, S.

10.1101/2021.10.09.463765 — Posted: 2021-10-09 — Discussion: 2022-05-31 Gigabyte

Ubiquitin Proteasome Pathway annotation in Diaphorina citri can reveal potential targets for RNAi based pest management

Tank, W., Shippy, T., Thate, A., Massimino, C., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.

10.1101/2021.10.11.464014 — Posted: 2021-10-13 — Discussion: 2022-03-09 Gigabyte

Annotation of glycolysis, gluconeogenesis, and trehaloneogenesis pathways provide insight into carbohydrate metabolism in the Asian citrus psyllid

Tamayo, B., Kercher, K., Vosburg, C., Massimino, C., Jernigan, M. R., Hasan, D. L., Harper, D., Mathew, A., Adkins, S., Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Panitz, N., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.

10.1101/2021.10.11.463922 — Posted: 2021-10-12 — Discussion: 2022-02-20 Gigabyte

Genomic identification, annotation, and comparative analysis of Vacuolar-type ATP synthase subunits in Diaphorina citri

Grace, R., Massimino, C., Shippy, T., Tank, W., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Benoit, J. B., Brown, S. J., Delia, T., Saha, S.

10.1101/2021.10.18.464890 — Posted: 2021-10-19 — Discussion: 2022-02-10 Gigabyte

Long-read assemblies reveal structural diversity in genomes of organelles - an example with Acacia pycnantha

Syme, A. E., McLay, T. G. B., Udovicic, F., Cantrill, D. J., Murphy, D. J.

10.1101/2020.12.22.423164 — Posted: 2020-12-23 — Discussion: 2021-12-22 Gigabyte

Atria: An Ultra-fast and Accurate Trimmer for Adapter and Quality Trimming

Chuan, J., Zhou, A., Hale, L. R., He, M., Li, X.

10.1101/2021.09.07.459340 — Posted: 2021-09-09 — Discussion: 2021-10-10 Gigabyte

epitopepredict: A tool for integrated MHC binding prediction

Farrell, D.

10.1101/2021.02.05.429892 — Posted: 2021-02-07 — Discussion: 2021-08-30 Gigabyte