bioRxiv/medRxiv TRiP Review Activity

456 Reviews — GigaScience — All Subjects

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YAMP: a framework enabling reproducibility in metagenomics research
Visconti, A., Martin, T. C., Falchi, M.
10.1101/223016 — Posted: 2017-11-21 — Discussion: 2022-01-22  GigaScience
Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning
Teng, H., Hall, M. B., Duarte, T., Cao, M. D., Coin, L.
10.1101/179531 — Posted: 2017-08-23 — Discussion: 2022-01-22  GigaScience
AMBER: Assessment of Metagenome BinnERs
Meyer, F., Hofmann, P., Belmann, P., Garrido-Oter, R., Fritz, A., Sczyrba, A., McHardy, A. C.
10.1101/239582 — Posted: 2017-12-25 — Discussion: 2022-01-22  GigaScience
Advanced Lesion Symptom Mapping Analyses And Implementation As BCBtoolkit
Foulon, C., Cerliani, L., Kinkingnehun, S., Levy, R., Rosso, C., Urbanski, M., Volle, E., Thiebaut de Schotten, M.
10.1101/133314 — Posted: 2017-05-02 — Discussion: 2022-01-22  GigaScience
Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction
Pospisil, J., Lukes, T., Bendesky, J., Fliegel, K., Spendier, K., Hagen, G. M.
10.1101/426296 — Posted: 2018-09-25 — Discussion: 2022-01-22  GigaScience
Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
Johnson, L. K., Alexander, H., Brown, C. T.
10.1101/323576 — Posted: 2018-05-17 — Discussion: 2022-01-22  GigaScience
Entering the era of conservation genomics: Cost-effective assembly of the African wild dog genome using linked long reads
Armstrong, E. E., Taylor, R. W., Prost, S., Blinston, P., van der Meer, E., Madzikanda, H., Mufute, O., Mandisodza, R., Steulpnagel, J., Sillero-Zubiri, C., Petrov, D.
10.1101/195180 — Posted: 2017-09-27 — Discussion: 2022-01-22  GigaScience
SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution
Xia, L. C., Ai, D., Lee, H., Andor, N., Li, C., Zhang, N. R., Ji, H. P.
10.1101/247536 — Posted: 2018-01-12 — Discussion: 2022-01-22  GigaScience
Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics and epigenetics data
Nguyen, Q. H., Tellam, R. L., Naval-Sanchez, M., Porto-Neto, L., Barendse, B. W., Reverter-Gomez, T., Hayes, B., Kijas, J., Dalrymple, B. P.
10.1101/143990 — Posted: 2017-06-05 — Discussion: 2022-01-22  GigaScience
MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data
Simon, L. M., Karg, S., Westermann, A. J., Engel, M., Elbehery, A. H., Hense, B., Heinig, M., Deng, L., Theis, F. J.
10.1101/269092 — Posted: 2018-02-22 — Discussion: 2022-01-22  GigaScience

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