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442 Reviews — GigaScience — All Subjects

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Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Dong, X., Chaisiri, K., Xia, D., Armstrong, S. D., Fang, Y., Donnelly, M. J., Kadowaki, T., McGarry, J. W., Darby, A. C., Makepeace, B. L.
10.1101/259044 — Posted: 2018-02-02 — Discussion: 2022-01-22  GigaScience
Whole genome hybrid assembly and protein-coding gene annotation of the entirely black native Korean chicken breed Yeonsan Ogye
Sohn, J.-i., Nam, K., Kim, J.-M., Lim, D., Lee, K.-T., Do, Y. J., Cho, C. Y., Kim, N., Nam, J.-W., Chae, H.-H.
10.1101/224311 — Posted: 2017-11-24 — Discussion: 2022-01-22  GigaScience
ASaiM: a Galaxy-based framework to analyze raw shotgun data from microbiota
Batut, B., Gravouil, K., Defois, C., Hiltemann, S., Brugere, J.-F., Peyretaillade, E., Peyret, P.
10.1101/183970 — Posted: 2017-09-04 — Discussion: 2022-01-22  GigaScience
Clustering trees: a visualisation for evaluating clusterings at multiple resolutions
Zappia, L., Oshlack, A.
10.1101/274035 — Posted: 2018-03-02 — Discussion: 2022-01-22  GigaScience
Necklace: combining reference and assembled transcriptomes for RNA-Seq analysis
Davidson, N. M., Oshlack, A.
10.1101/200287 — Posted: 2017-10-09 — Discussion: 2022-01-22  GigaScience
Reproducible genomics analysis pipelines with GNU Guix
Wurmus, R., Uyar, B., Osberg, B., Franke, V., Gosdschan, A., Wreczycka, K., Ronen, J., Akalin, A.
10.1101/298653 — Posted: 2018-04-11 — Discussion: 2022-01-22  GigaScience
YAMP: a framework enabling reproducibility in metagenomics research
Visconti, A., Martin, T. C., Falchi, M.
10.1101/223016 — Posted: 2017-11-21 — Discussion: 2022-01-22  GigaScience
NAT/NCS2-hound: A webserver for the detection and evolutionary classification of prokaryotic and eukaryotic nucleobase-cation symporters of the NAT/NCS2 family.
Chaliotis, A., Vlastaridis, P., Ntountoumi, C., Botou, M., Yalelis, V., Lazou, P., Tatsaki, K., Mossialos, D., Frillingos, S., Amoutzias, G.
10.1101/332452 — Posted: 2018-05-28 — Discussion: 2022-01-22  GigaScience
Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning
Teng, H., Hall, M. B., Duarte, T., Cao, M. D., Coin, L.
10.1101/179531 — Posted: 2017-08-23 — Discussion: 2022-01-22  GigaScience
Advanced Lesion Symptom Mapping Analyses And Implementation As BCBtoolkit
Foulon, C., Cerliani, L., Kinkingnehun, S., Levy, R., Rosso, C., Urbanski, M., Volle, E., Thiebaut de Schotten, M.
10.1101/133314 — Posted: 2017-05-02 — Discussion: 2022-01-22  GigaScience

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