bioRxiv/medRxiv TRiP Review Activity

406 Reviews — GigaScience — All Subjects

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ASaiM: a Galaxy-based framework to analyze raw shotgun data from microbiota
Batut, B., Gravouil, K., Defois, C., Hiltemann, S., Brugere, J.-F., Peyretaillade, E., Peyret, P.
10.1101/183970 — Posted: 2017-09-04 — Discussion: 2022-01-22  GigaScience
Independent assessment and improvement of wheat genome assemblies using Fosill jumping libraries
Lu, F.-H., McKenzie, N., Kettleborough, G., Heavens, D., Clark, M. D., Bevan, M. W.
10.1101/219352 — Posted: 2017-11-14 — Discussion: 2022-01-22  GigaScience
MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networks
Peng, Y., Tang, S., WANG, D., Zhong, H., Jia, H., Cai, X., Zhang, Z., Xiao, M., Yang, H., Wang, J., Kristiansen, K., Xu, X., li, j.
10.1101/398636 — Posted: 2018-08-24 — Discussion: 2022-01-22  GigaScience
MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data
Simon, L. M., Karg, S., Westermann, A. J., Engel, M., Elbehery, A. H., Hense, B., Heinig, M., Deng, L., Theis, F. J.
10.1101/269092 — Posted: 2018-02-22 — Discussion: 2022-01-22  GigaScience
Necklace: combining reference and assembled transcriptomes for RNA-Seq analysis
Davidson, N. M., Oshlack, A.
10.1101/200287 — Posted: 2017-10-09 — Discussion: 2022-01-22  GigaScience
A databank for intracellular electrophysiological mapping of the adult somatosensory cortex
Lantyer, A. d. S., Calcini, N., Biljsma, A., Kole, K., Emmelkamp, M., Peeters, M., Scheenen, W. J. J., Zeldenrust, F., Celikel, T.
10.1101/472043 — Posted: 2018-11-17 — Discussion: 2022-01-22  GigaScience
FAST-SG: An alignment-free algorithm for hybrid assembly
Di Genova, A., Ruz, G. A., Sagot, M.-F., Maass, A.
10.1101/209122 — Posted: 2017-10-26 — Discussion: 2022-01-22  GigaScience
SMRT long-read sequencing and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica)
Formenti, G., Chiara, M., Poveda, L., Francoijs, K.-J., Bonisoli-Alquati, A., Canova, L., Gianfranceschi, L. E. A., Horner, D., Saino, N.
10.1101/374512 — Posted: 2018-07-23 — Discussion: 2022-01-22  GigaScience
Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning
Teng, H., Hall, M. B., Duarte, T., Cao, M. D., Coin, L.
10.1101/179531 — Posted: 2017-08-23 — Discussion: 2022-01-22  GigaScience
Advanced Lesion Symptom Mapping Analyses And Implementation As BCBtoolkit
Foulon, C., Cerliani, L., Kinkingnehun, S., Levy, R., Rosso, C., Urbanski, M., Volle, E., Thiebaut de Schotten, M.
10.1101/133314 — Posted: 2017-05-02 — Discussion: 2022-01-22  GigaScience

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