bioRxiv/medRxiv TRiP Review Activity

359 Reviews — GigaScience — All Subjects

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NanoSim: nanopore sequence read simulator based on statistical characterization
Chen Yang, Justin Chu, René L Warren, Inanç Birol
10.1101/044545 — Posted: 2016-03-18 — Discussion: 2022-01-13  GigaScience
16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model
Luo, R., Schatz, M. C., Salzberg, S.
10.1101/111393 — Posted: 2017-02-24 — Discussion: 2022-01-13  GigaScience
The Healthy Brain Network Serial Scanning Initiative: A resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions.
David O'Connor, Natan Vega Potler, Meagan Kovacs, Ting Xu, Lei Ai, John Pellman, Tamara Vanderwal, Lucas Parra, Samantha Cohen, Satrajit Ghosh, Jasmine Escalera, Natalie Grant-Villegas, Yael Osman, Anastasia Bui, Richard Cameron Craddock, Michael Peter Milham
10.1101/078881 — Posted: 2016-10-03 — Discussion: 2022-01-04  GigaScience
Species-level resolution of 16S rRNA gene amplicons sequenced through MinIONTM portable nanopore sequencer
Alfonso Benitez-Paez, Kevin Portune, Yolanda Sanz
10.1101/021758 — Posted: 2015-07-01 — Discussion: 2022-01-03  GigaScience
Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions
Victor Resco de Dios, Arthur Gessler, Juan Pedro Ferrio, Josu G. Alday, Michael Bahn, Jorge del Castillo, Sebastien Devidal, Sonia Garcia-Munoz, Zachary Kayler, Damien Landais, Paula Martin-Gomez, Alexandru Milcu, Clement Piel, Karin Pirhofer-Walzl, Olivier Ravel, Serajis Salekin, David T Tissue, Mark G Tjoelker, Jordi Voltas, Jacques Roy
10.1101/054593 — Posted: 2016-05-21 — Discussion: 2022-01-03  GigaScience
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
Minh Duc Cao, Devika Ganesamoorthy, Alysha Elliott, Huihui Zhang, Matthew Cooper, Lachlan Coin
10.1101/019356 — Posted: 2015-05-15 — Discussion: 2022-01-03  GigaScience
AGOUTI: improving genome assembly and annotation using transcriptome data
Simo V Zhang, Luting Zhuo, Matthew W Hahn
10.1101/033019 — Posted: 2015-11-26 — Discussion: 2022-01-03  GigaScience
Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature
Lange, M., Alako, B., Cochrane, G., Ghaffar, M., Mascher, M., Habekost, P.-K., Hillebrand, U., Scholz, U., Zunder, F., Freitag, J., Scholz, A. H.
10.1101/2021.05.10.443393 — Posted: 2021-05-10 — Discussion: 2022-01-03  GigaScience
ISA API: An open platform for interoperable life science experimental metadata
Johnson, D., Cochrane, K., Davey, R. P., Etuk, A., Gonzalez-Beltran, A., Haug, K., Izzo, M., Larralde, M., Lawson, T. N., Minotto, A., Moreno, P., Nainala, V. C., O'Donovan, C., Pireddu, L., Roger, P., Shaw, F., Steinbeck, C., Weber, R. J., Sansone, S.-A., Rocca-Serra, P.
10.1101/2020.11.13.382119 — Posted: 2020-11-16 — Discussion: 2022-01-03  GigaScience
NCBI BLAST+ integrated into Galaxy
Peter J. A. Cock, John M. Chilton, Björn Grüning, James E. Johnson, Nicola Soranzo
10.1101/014043 — Posted: 2015-01-21 — Discussion: 2022-01-03  GigaScience

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