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436 Reviews — All Partners — Genomics

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HyDrop: droplet-based scATAC-seq and scRNA-seq using dissolvable hydrogel beads
De Rop, F. V., Ismail, J. N., Bravo Gonzalez-Blas, C., Hulselmans, G. J., Flerin, C. C., Janssens, J., Theunis, K., Christiaens, V. M., Wouters, J., Marcassa, G., de Wit, J., Poovathingal, S., Aerts, S.
10.1101/2021.06.04.447104 — Posted: 2021-06-06 — Discussion: 2022-02-09  eLife
Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome
Song, B., Song, Y., Fu, Y., Kizito, E. B., Kabod, P. N., Liu, H., Kamenya, S. N., Muthemba, S., Kariba, R., Li, X., Wang, S., Cheng, S., Muchugi, A., Jamnadass, R., Shapiro, H.-Y., Deynze, A. V., Yang, H., Wang, J., Xu, X., Odeny, D. A., Liu, X.
10.1101/532077 — Posted: 2019-01-28 — Discussion: 2022-01-31  GigaScience
Genetic Analyses of Epigenetic Predictors that Estimate Aging, Metabolic Traits, and Lifespan
Mozhui, K., Lu, A., Li, C. Z., Haghani, A., Sandoval-Sierra, J. V., Williams, R. W., Horvath, S.
10.1101/2021.06.23.449634 — Posted: 2021-06-24 — Discussion: 2022-01-31  eLife
Chromosome-level assembly of the common vetch reference genome (Vicia sativa)
Xi, H., nguyen, V., Ward, C. M., Searle, I. R.
10.1101/2021.10.11.464017 — Posted: 2021-10-13 — Discussion: 2022-01-31  Gigabyte
Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacbio Sequel II system and ultralong reads of Oxford Nanopore
Lang, D., Zhang, S., Ren, P., Liang, F., Sun, Z., Meng, G., Tan, Y., Hu, J., Li, X., Lai, Q., Han, L., Wang, D., Hu, F., Wang, W., Liu, S.
10.1101/2020.02.13.948489 — Posted: 2020-02-14 — Discussion: 2022-01-24  GigaScience
High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome
Marrano, A., Britton, M., Zaini, P. A., Zimin, A., Workman, R., Puiu, D., Bianco, L., Di Pierro, E. A., Allen, B., Chakraborty, S., Troggio, M., Leslie, C., Timp, W., Dendekar, A., Salzberg, S., Neale, D. B.
10.1101/809798 — Posted: 2019-10-17 — Discussion: 2022-01-24  GigaScience
A chromosome-level genome assembly for the Eastern Fence Lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology
Westfall, A. K., Telemeco, R. S., Grizante, M. B., Waits, D. S., Clark, A. D., Simpson, D. Y., Klabacka, R. L., Sullivan, A. P., Perry, G. H., Sears, M. W., Cox, C. L., Cox, R. M., Gifford, M. E., John-Alder, H. B., Langkilde, T., Angilletta, M., Leache, A., Tollis, M., Kusumi, K., Schwartz, T. S.
10.1101/2020.06.06.138248 — Posted: 2020-06-06 — Discussion: 2022-01-24  GigaScience
Multivariate GWAS: Generalized Linear Models, Prior Weights, and Double Sparsity
Chu, B. B., Keys, K. L., Sinsheimer, J. S., Lange, K.
10.1101/697755 — Posted: 2019-07-11 — Discussion: 2022-01-24  GigaScience
The Gene-Rich Genome of the Scallop Pecten maximus
Kenny, N. J., McCarthy, S. A., Dudchenko, O., James, K., Betteridge, E., Corton, C., Dolucan, J., Mead, D., Oliver, K., Omer, A. D., Pelan, S., Ryan, Y., Sims, Y., Skelton, J., Smith, M., Torrance, J., Weisz, D., Wipat, A., Aiden, E. L., Howe, K., Williams, S. T.
10.1101/2020.01.08.887828 — Posted: 2020-01-09 — Discussion: 2022-01-24  GigaScience
Genome Diversity in Ukraine
Oleksyk, T. K., Wolfsberger, W. W., Weber, A., Shchubelka, K., Oleksyk, O. T., Levchuk, O., Patrus, A., Lazar, N., Castro-Marquez, S. O., Boldyzhar, P., Urbanovych, A., Stakhovska, V., Malyar, K., Chervyakova, S., Podoroha, O., Kovalchuk, N., Hasynets, Y., Rodriguez-Flores, J. L., Medley, S., Battistuzzi, F. U., Liu, R., Hou, Y., Chen, S., Yang, H., Yeager, M., Dean, M., Mills, R. E., Smolanka, V.
10.1101/2020.08.07.238329 — Posted: 2020-08-07 — Discussion: 2022-01-24  GigaScience

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