bioRxiv/medRxiv TRiP Review Activity

477 Reviews — All Partners — Bioinformatics

Most recent first Previous |  Page 24: Articles 231-240  | Next

Spacemake: processing and analysis of large-scale spatial transcriptomics data
Sztanka-Toth, T. R., Jens, M., Karaiskos, N., Rajewsky, N.
10.1101/2021.11.07.467598 — Posted: 2021-11-08 — Discussion: 2023-02-15  GigaScience
Loop detection using Hi-C data with HiCExplorer
Wolff, J., Backofen, R., Gruening, B.
10.1101/2020.03.05.979096 — Posted: 2020-03-06 — Discussion: 2023-02-15  GigaScience
RAREFAN: a webservice to identify REPINs and RAYTs in bacterial genomes
Fortmann-Grote, C., Balk, J., Bertels, F.
10.1101/2022.05.22.493013 — Posted: 2022-05-24 — Discussion: 2023-02-08  Peer Community In
ProteInfer: deep networks for protein functional inference
Sanderson, T., Bileschi, M. L., Belanger, D., Colwell, L.
10.1101/2021.09.20.461077 — Posted: 2021-09-23 — Discussion: 2023-02-08  eLife
CriSNPr: a single interface for the curated and de-novo design of gRNAs for CRISPR diagnostics using diverse Cas systems
Chakraborty, D., Ansari, A. H., Kumar, M., Sarkar, S., Maiti, S.
10.1101/2022.02.17.479653 — Posted: 2022-02-17 — Discussion: 2023-01-25  eLife
Comparative analysis of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing
Liu, J., Tran, V., Vemuri, V. N. P., Byrne, A., Borja, M., Agarwal, S., Wang, R., Awayan, K., Murti, A., Taychameekiatchai, A., Wang, B., Emanuel, G., He, J., Haliburton, J., Pisco, A. O., Neff, N.
10.1101/2022.03.04.483068 — Posted: 2022-03-07 — Discussion: 2023-01-19  EMBO Press
CRISPR-Analytics (CRISPR-A): a platform for precise analytics and simulations for gene editing
Sanvicente, M., Garcia-Valiente, A., Jouide, S., Jaraba-Wallace, J., Bautista, E., Escobosa, M., Sanchez-Mejias, A., Güell, M.
10.1101/2022.09.02.506351 — Posted: 2022-09-03 — Discussion: 2023-01-12  Review Commons
Network-based multi-omics integration reveals metabolic risk profile within treated HIV-infection
Mikaeloff, F., Gelpi, M., Benfeitas, R., Knudsen, A. D., Vestad, B., Hogh, J., Hov, J., Benfield, T., Murray, D., Giske, C. G., Mardinoglu, A., Troseid, M., Poulsen, S. D., Neogi, U.
10.1101/2022.06.08.495246 — Posted: 2022-06-13 — Discussion: 2023-01-04  eLife
Decoding rRNA Sequences for Improved Metagenomics in Sylvatic Mosquito Species
Koh, C., Frangeul, L., Blanc, H., Ngoagouni, C., Boyer, S., Dussart, P., Grau, N., Girod, R., Duchemin, J.-B., Saleh, M. C.
10.1101/2022.02.01.478639 — Posted: 2022-02-03 — Discussion: 2022-12-30  eLife
Toeholder: a software for automated design and in silico validation of toehold riboswitches
Cisneros Caballero, A. F., Rouleau, F. D., Bautista, C., Lemieux, P., Dumont-Leblond, N.
10.1101/2021.11.09.467922 — Posted: 2021-11-11 — Discussion: 2022-12-17  Peer Community In

Evaluation Sources