bioRxiv/medRxiv TRiP Review Activity

474 Reviews — All Partners — Genomics

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Benchmarking ultra-high molecular weight DNA preservation methods for long-read and long-range sequencing
Dahn, H. A., Mountcastle, J., Balacco, J., Winkler, S., Bista, I., Schmitt, A. D., Vinnere Pettersson, O., Formenti, G., Oliver, K., Smith, M., Tan, W., Kraus, A., Mac, S., Komoroske, L. M., Lama, T., Crawford, A. J., Murphy, R. W., Brown, S., Scott, A. F., Morin, P. A., Jarvis, E. D., Fedrigo, O.
10.1101/2021.07.13.451380 — Posted: 2021-07-14 — Discussion: 2023-03-01  GigaScience
Improvements to the Gulf Pipefish Syngnathus scovelli Genome
Ramesh, B., Small, C., Healey, H., Johnson, B., Barker, E., Currey, M., Bassham, S., Myers, M., Cresko, W., Jones, A.
10.1101/2023.01.23.525209 — Posted: 2023-01-24 — Discussion: 2023-03-01  Gigabyte
Genome-wide DNA methylation profiles in smoking discordant and concordant monozygotic twin pairs
van Dongen, J., Willemsen, G., BIOS Consortium, , de Geus, E. J. C., Boomsma, D. I., Neale, M. C.
10.1101/2022.08.17.504357 — Posted: 2022-08-19 — Discussion: 2023-03-01  eLife
Weak parent-of-origin expression bias: is this imprinting?
Edwards, C. A., Watkisnon, W. M. D., Telerman, S. B., Hulsmann, L. C., Hamilton, R. S., Ferguson-Smith, A. C.
10.1101/2022.08.21.504536 — Posted: 2022-08-21 — Discussion: 2023-02-28  eLife
Performance and limitations of linkage-disequilibrium-basedmethods for inferring the genomic landscape of recombination anddetecting hotspots: a simulation study
Raynaud, M., Gagnaire, P.-A., Galtier, N.
10.1101/2022.03.30.486352 — Posted: 2022-03-31 — Discussion: 2023-02-24  Peer Community In
A curated human cellular microRNAome based on 196 primary cell types
Patil, A. H., Baran, A., Brehm, Z., McCall, M. N., Halushka, M. K.
10.1101/2022.05.16.492160 — Posted: 2022-05-17 — Discussion: 2023-02-17  GigaScience
High-Spatiotemporal-Resolution Nanopore Sequencing of SARS-CoV-2 and Host Cell RNAs
Tombacz, D., Dormo, A., Gulyas, G., Csabai, Z., Prazsak, I., Kakuk, B., Harangozo, A., Jankovics, I., Denes, B., Boldogkoi, Z.
10.1101/2021.08.20.457128 — Posted: 2021-08-20 — Discussion: 2023-02-17  GigaScience
Karyon: a computational framework for the diagnosis of hybrids, aneuploids, and other non-standard architectures in genome assemblies.
Naranjo-Ortiz, M. A., Molina, M., Mixao, V., Gabaldon, T.
10.1101/2021.05.23.445324 — Posted: 2021-05-23 — Discussion: 2023-02-17  GigaScience
Non-invasive real-time genomic monitoring of the critically endangered kakapo
Urban, L., Miller, A. K., Eason, D., Vercoe, D., Shaffer, M., Wilkinson, S. P., Jeunen, G.-J., Gemmell, N. J., Digby, A.
10.1101/2022.11.14.516431 — Posted: 2022-11-17 — Discussion: 2023-02-16  eLife
Construction of a new chromosome-scale, long-read reference genome assembly of the Syrian hamster, Mesocricetus auratus
Harris, R. A., Raveendran, M., Lyfoung, D. T., Sedlazeck, F. J., Mahmoud, M., Prall, T., Karl, J., Doddapaneni, H., Meng, Q., Han, Y., Muzny, D., Wiseman, R. W., O'Connor, D. H., Rogers, J.
10.1101/2021.07.05.451071 — Posted: 2021-07-05 — Discussion: 2023-02-15  GigaScience

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