bioRxiv/medRxiv TRiP Review Activity

436 Reviews — All Partners — Genomics

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Vesalius: Tissue anatomy from spatial transcriptomic data.
Martin, P. C. N., Lövkvist, C., Hong, B.-W., Won, K. J.
10.1101/2021.08.13.456235 — Posted: 2021-08-14 — Discussion: 2022-11-21  EMBO Press
The chromatin factor ROW cooperates with BEAF-32 in regulating long-range genes
Herman, N., Kadener, S., Shifman, S.
10.1101/2021.03.08.434270 — Posted: 2021-03-08 — Discussion: 2022-11-21  EMBO Press
Dynamic chromosomal interactions and control of heterochromatin positioning by Ki67
van Schaik, T., Manzo, S. G., Vouzas, A. E., Gilbert, D. M., van Steensel, B.
10.1101/2021.10.20.465140 — Posted: 2021-10-20 — Discussion: 2022-11-21  EMBO Press
Pan-cancer association of DNA repair deficiencies with whole-genome mutational patterns
Soerensen, S. G., Shrikhande, A., Poulsgaard, G. A., Christensen, M. H., Bertl, J., Hoffmann, E. R., Pedersen, J. S.
10.1101/2022.01.31.478445 — Posted: 2022-02-03 — Discussion: 2022-11-18  eLife
Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
Uszczynska-Ratajczak, B., Sugunan, S., Kwiatkowska, M., Migdal, M., Carbonell-Sala, S., Sokol, A. M., Winata, C. L., Chacinska, A.
10.1101/2021.12.22.473872 — Posted: 2021-12-23 — Discussion: 2022-11-15  EMBO Press
Highly accurate isoform identification for the human transcriptome
Sommer, M. J., Cha, S., Varabyou, A., Rincon, N., Park, S., Minkin, I., Pertea, M., Steinegger, M., Salzberg, S.
10.1101/2022.06.08.495354 — Posted: 2022-06-09 — Discussion: 2022-10-31  eLife
Replication-associated inversions are the dominant form of bacterial chromosome structural variation
D'Iorio, M., Dewar, K.
10.1101/2022.02.15.480581 — Posted: 2022-02-15 — Discussion: 2022-10-27  EMBO Press
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants
Einarsson, H., Salvatore, M., Vaagenso, C., Alcaraz, N., Bornholdt Lange, J., Rennie, S., Andersson, R.
10.1101/2021.10.29.466407 — Posted: 2021-10-30 — Discussion: 2022-10-27  eLife
Brown adipocytes local response to thyroid hormone is required for adaptive thermogenesis in adult male mice
Zekri, Y., Guyot, R., Suner, I. G., Canaple, L., Stein, A. G., Petit, J. V., Aubert, D., Richard, S., Flamant, F., Gauthier, K.
10.1101/2022.08.03.502639 — Posted: 2022-08-06 — Discussion: 2022-10-20  eLife
Uncovering perturbations in human hematopoiesis associated with healthy aging and myeloid malignancies at single cell resolution
Ainciburu, M., Ezponda, T., Berastegui, N., Alfonso-Pierola, A., Vilas-Zornoza, A., San Martin-Uriz, P., Alignani, D., Lamo de Espinosa, J., San Julian, M., Jimenez, T., Lopez, F., Muntion, S., Sanchez-Guijo, F., Molero, A., Montoro, J., Serrano, G., Diaz-Mazkiaran, A., Lasaga, M., Gomez-Cabrero, D., Diez-Campelo, M., Valcarcel, D., Hernaez, M., Romero, J. P., Prosper, F.
10.1101/2021.07.30.454542 — Posted: 2021-07-31 — Discussion: 2022-10-17  eLife

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