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475 Reviews — All Partners — Genomics

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Construction of a new chromosome-scale, long-read reference genome assembly of the Syrian hamster, Mesocricetus auratus
Harris, R. A., Raveendran, M., Lyfoung, D. T., Sedlazeck, F. J., Mahmoud, M., Prall, T., Karl, J., Doddapaneni, H., Meng, Q., Han, Y., Muzny, D., Wiseman, R. W., O'Connor, D. H., Rogers, J.
10.1101/2021.07.05.451071 — Posted: 2021-07-05 — Discussion: 2023-02-15  GigaScience
Comprehensive characterization of the transcriptional response to COVID-19 in multiple organs reveals shared signatures across tissues
The COVID Tissue Atlas Consortium, , Granados, A. A., Bucher, S., Agrawal, A., Song, H., Chen, A. T., Peng, T., Neff, N., Pisco, A. O., Huang, F., Wang, B.
10.1101/2022.05.31.493925 — Posted: 2022-05-31 — Discussion: 2023-02-15  eLife
A genome-wide CRISPR functional survey of the human phagocytosis molecular machinery
Essletzbichler, P., Sedlyarov, V., Frommelt, F., Soulat, D., Heinz, L. X., Stefanovic, A., Neumayer, B., Superti-Furga, G.
10.1101/2022.09.08.507072 — Posted: 2022-09-08 — Discussion: 2023-02-14  EMBO Press
Multiple shifts in gene network interactions shape phenotypes of Drosophila melanogaster selected for long and short night sleep duration
Souto-Maior, C., Lin, Y., Serrano Negron, Y. L., Harbison, S. T.
10.1101/2021.07.11.451943 — Posted: 2021-07-12 — Discussion: 2023-02-13  Review Commons
Multi-tissue landscape of somatic mtDNA mutations indicates tissue specific accumulation and removal in aging
Sanchez-Contreras, M., Sweetwyne, M. T., Tsantilas, K. A., Whitson, J. A., Campbell, M. D., Kohrn, B. F., Kim, H.-J., Fredrickson, J., Nguyen, M. M., Hurley, J. B., Marcinek, D. J., Rabinovitch, P. S., Kennedy, S. R.
10.1101/2022.08.30.505884 — Posted: 2022-09-01 — Discussion: 2023-02-10  eLife
Nematodes can survive in a suspended form of life for indefinite time
Shatilovich, A., Gade, V. R., Pippel, M., Hoffmeyer, T. T., Tchesunov, A. V., Stevens, L., Winkler, S., Hughes, G. M., Traikov, S., Hiller, M., Rivkina, E., Schiffer, P. H., Myers, E. W., Kurzchalia, T. V.
10.1101/2022.01.28.478251 — Posted: 2022-01-28 — Discussion: 2023-02-10  Peer Community In
De novo discovery of traits co-occurring with chronic obstructive pulmonary disease
Golovina, E., Fadason, T., Jaros, R. K., Kumar, H., John, J., Burrowes, K., Tawhai, M., O'Sullivan, J. M.
10.1101/2022.07.20.500731 — Posted: 2022-07-21 — Discussion: 2023-01-25  EMBO Press
Activity-based CRISPR Scanning Uncovers Allostery in DNA Methylation Maintenance Machinery
Ngan, K. C., Hoenig, S. M., Gosavi, P. M., Tanner, D. A., Lue, N. Z., Garcia, E. M., Lee, C., Liau, B. B.
10.1101/2022.05.14.491958 — Posted: 2022-05-15 — Discussion: 2023-01-02  eLife
Copy number footprints of platinum-based anticancer therapies
Gonzalez, S., Lopez-Bigas, N., Gonzalez-Perez, A.
10.1101/2022.11.24.517816 — Posted: 2022-11-24 — Discussion: 2022-12-29  Review Commons
Zooanthroponotic transmission of SARS-CoV-2 and host-specific viral mutations revealed by genome-wide phylogenetic analysis
Naderi, S., Chen, P., Murall, C. L., Poujol, R., Kraemer, S. A., Pickering, B. S., Sagan, S. M., Shapiro, B. J.
10.1101/2022.06.02.494559 — Posted: 2022-06-06 — Discussion: 2022-12-22  eLife

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