bioRxiv/medRxiv TRiP Review Activity

453 Reviews — All Partners — Genomics

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Pan-cancer association of DNA repair deficiencies with whole-genome mutational patterns
Soerensen, S. G., Shrikhande, A., Poulsgaard, G. A., Christensen, M. H., Bertl, J., Hoffmann, E. R., Pedersen, J. S.
10.1101/2022.01.31.478445 — Posted: 2022-02-03 — Discussion: 2022-11-18  eLife
Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
Uszczynska-Ratajczak, B., Sugunan, S., Kwiatkowska, M., Migdal, M., Carbonell-Sala, S., Sokol, A. M., Winata, C. L., Chacinska, A.
10.1101/2021.12.22.473872 — Posted: 2021-12-23 — Discussion: 2022-11-15  EMBO Press
Highly accurate isoform identification for the human transcriptome
Sommer, M. J., Cha, S., Varabyou, A., Rincon, N., Park, S., Minkin, I., Pertea, M., Steinegger, M., Salzberg, S.
10.1101/2022.06.08.495354 — Posted: 2022-06-09 — Discussion: 2022-10-31  eLife
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants
Einarsson, H., Salvatore, M., Vaagenso, C., Alcaraz, N., Bornholdt Lange, J., Rennie, S., Andersson, R.
10.1101/2021.10.29.466407 — Posted: 2021-10-30 — Discussion: 2022-10-27  eLife
Replication-associated inversions are the dominant form of bacterial chromosome structural variation
D'Iorio, M., Dewar, K.
10.1101/2022.02.15.480581 — Posted: 2022-02-15 — Discussion: 2022-10-27  EMBO Press
Brown adipocytes local response to thyroid hormone is required for adaptive thermogenesis in adult male mice
Zekri, Y., Guyot, R., Suner, I. G., Canaple, L., Stein, A. G., Petit, J. V., Aubert, D., Richard, S., Flamant, F., Gauthier, K.
10.1101/2022.08.03.502639 — Posted: 2022-08-06 — Discussion: 2022-10-20  eLife
Uncovering perturbations in human hematopoiesis associated with healthy aging and myeloid malignancies at single cell resolution
Ainciburu, M., Ezponda, T., Berastegui, N., Alfonso-Pierola, A., Vilas-Zornoza, A., San Martin-Uriz, P., Alignani, D., Lamo de Espinosa, J., San Julian, M., Jimenez, T., Lopez, F., Muntion, S., Sanchez-Guijo, F., Molero, A., Montoro, J., Serrano, G., Diaz-Mazkiaran, A., Lasaga, M., Gomez-Cabrero, D., Diez-Campelo, M., Valcarcel, D., Hernaez, M., Romero, J. P., Prosper, F.
10.1101/2021.07.30.454542 — Posted: 2021-07-31 — Discussion: 2022-10-17  eLife
Mouse B2 SINE elements function as IFN-inducible enhancers
Horton, I., Kelly, C. J., Simpson, D. M., Chuong, E.
10.1101/2022.08.02.502523 — Posted: 2022-08-04 — Discussion: 2022-10-13  eLife
Transcriptional profiling of Hutchinson-Gilford Progeria syndrome fibroblasts reveals deficits in mesenchymal stem cell commitment to differentiation related to early events in endochondral ossification.
San Martin, R., Das, P., Sanders, J. T., Hill, A. M., McCord, R. P.
10.1101/2022.06.21.497024 — Posted: 2022-06-21 — Discussion: 2022-10-13  eLife
Evaluation of CA repeat arrays as targets for MeCP2 function in the brain
Chhatbar, K., Connelly, J., Webb, S., Kriaucionis, S., Bird, A.
10.1101/2022.04.26.489598 — Posted: 2022-04-26 — Discussion: 2022-10-08  EMBO Press

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