Channel:  BICCN/BICAN

46 Articles

Evolution of neuronal cell classes and types in the vertebrate retina
Hahn, J., Monavarfeshani, A., Qiao, M., Kao, A., Kölsch, Y., Kumar, A., Kunze, V. P., Rasys, A. M., Richardson, R., Baier, H., Lucas, R. J., Li, W., Meister, M., Trachtenberg, J. T., Yan, W., Peng, Y.-R., Sanes, J., Shekhar, K.
10.1101/2023.04.07.536039 — Posted: 2023-04-08
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate neocortex
Zemke, N. R., Armand, E. J., Wang, W., Lee, S., Zhou, J., Li, Y. E., Liu, H., Tian, W., Nery, J. R., Castanon, R. G., Bartlett, A., Osteen, J. K., Li, D., Zhuo, X., Xu, V., Miller, M., Krienen, F. M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S. A., Callaway, E. M., Wang, T., Behrens, M., Lein, E. S., Ecker, J. R., Ren, B.
10.1101/2023.04.08.536119 — Posted: 2023-04-08
Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development
Joglekar, A., Hu, W., Zhang, B., Narykov, O., Diekhans, M., Balacco, J., Ndhlovu, L., Milner, T. A., Fedrigo, O., Jarvis, E. D., Sheynkman, G. M., Korkin, D., Ross, M. E., Tilgner, H. U.
10.1101/2023.04.02.535281 — Posted: 2023-04-04
A Universal Method for Crossing Molecular and Atlas Modalities using Simplex-Based Image Varifolds and Quadratic Programming
Stouffer, K. M., Trouve, A., Younes, L., Kunst, M., Ng, L., Zeng, H., Anant, M., Fan, J., Kim, Y., Miller, M. I.
10.1101/2023.03.28.534622 — Posted: 2023-03-29
The cell type composition of the adult mouse brain revealed by single cell and spatial genomics
Langlieb, J., Sachdev, N., Balderrama, K., Nadaf, N., Raj, M., Murray, E., Webber, J., Vanderburg, C., Gazestani, V., Tward, D., Mezias, C., Li, X., Cable, D., Norton, T., Mitra, P. P., Chen, F., Macosko, E.
10.1101/2023.03.06.531307 — Posted: 2023-03-13
A molecularly defined and spatially resolved cell atlas of the whole mouse brain
Zhang, M., Pan, X., Jung, W., Halpern, A., Eichhorn, S. W., Lei, Z., Cohen, L., Smith, K. A., Tasic, B., Yao, Z., Zeng, H., Zhuang, X.
10.1101/2023.03.06.531348 — Posted: 2023-03-07
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Yao, Z., van Velthoven, C. T. J., Kunst, M., Zhang, M., McMillen, D., Lee, C., Jung, W., Goldy, J., Abdelhak, A., Baker, P., Barkan, E., Bertagnolli, D., Campos, J., Carey, D., Casper, T., Chakka, A. B., Chakrabarty, R., Chavan, S., Chen, M., Clark, M., Close, J., Crichton, K., Daniel, S., Dolbeare, T., Ellingwood, L., Gee, J., Glandon, A., Gloe, J., Gould, J., Gray, J., Guilford, N., Guzman, J., Hirschstein, D., Ho, W., Jin, K., Kroll, M., Lathia, K., Leon, A., Long, B., Maltzer, Z., Martin, N., McCue, R., Meyerdierks, E., Nguyen, T. N., Pham, T., Rimorin, C., Ruiz, A., Shapovalova, N., Slaug
10.1101/2023.03.06.531121 — Posted: 2023-03-06
A comparative atlas of single-cell chromatin accessibility in the human brain
Li, Y. E., Preissl, S., Miller, M., Johnson, N. D., Wang, Z., Jiao, H., Zhu, C., Wang, Z., Xie, Y., Poirin, O., Kern, C., Pinto-Duarte, A., Tian, W., Siletti, K., Emerson, N., Osteen, J., Lucero, J., Lin, L., Yang, Q., Espinoza, S., Zhu, Q., Zemke, N., Yanny, A. M., Nyhus, J., Dee, N., Casper, T., Shapovalova, N., Hirschstein, D., Hodge, R. D., Linnarsson, S., Bakken, T. E., Levi, B., Keene, C. D., Shang, J., Lein, E. S., Wang, A., Behrens, M. M., Ecker, J. R., Ren, B.
10.1101/2022.11.09.515833 — Posted: 2022-11-10
Signature morpho-electric properties of diverse GABAergic interneurons in the human neocortex
Lee, B., Dalley, R., Miller, J. A., Chartrand, T., Close, J., Mann, R., Mukora, A., Ng, L., Alfiler, L., Baker, K., Bertagnolli, D., Brouner, K., Casper, T., Csajbok, E., Dee, N., Donadio, N., Driessens, S. L. W., Egdorf, T., Enstrom, R., Galakhova, A. A., Gary, A., Gelfand, E., Goldy, J., Hadley, K., Heistek, T. S., Hill, D., Johansen, N., Jorstad, N., Kim, L., Kocsis, A. K., Kruse, L., Kunst, M., Leon, G., Long, B., Mallory, M., Maxwell, M., McGraw, M., McMillen, D., Melief, E. J., Molnar, G., Mortrud, M. T., Newman, D., Nyhus, J., Opitz-Araya, X., Pham, T., Pom, A., Potekhina, L., Rajanbabu
10.1101/2022.11.08.515739 — Posted: 2022-11-09
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
Jorstad, N. L., Close, J., Johansen, N., Yanny, A. M., Barkan, E. R., Travaglini, K. J., Bertagnolli, D., Campos, J., Casper, T., Crichton, K., Dee, N., Ding, S.-L., Gelfand, E., Goldy, J., Hirschstein, D., Kroll, M., Kunst, M., Lathia, K., Long, B., Martin, N., McMillen, D., Pham, T., Rimorin, C., Ruiz, A., Shapovalova, N., Shehata, S., Siletti, K., Somasundaram, S., Sulc, J., Tieu, M., Torkelson, A., Tung, H., Ward, K., Callaway, E. M., Hof, P. R., Keene, C. D., Levi, B. P., Linnarsson, S., Mitra, P. P., Smith, K., Hodge, R. D., Bakken, T. E., Lein, E. S.
10.1101/2022.11.06.515349 — Posted: 2022-11-06

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