Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

467 Articles

Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum
Dudchenko, O., Pham, M., Lui, C., Batra, S. S., Hoeger, M., Nyquist, S. K., Durand, N. C., Shamim, M. S., Machol, I., Erskine, W., Aiden, E. L., Kaur, P.
10.1101/473553 — Posted: 2018-11-20
Simultaneous profiling of DNA methylation and chromatin architecture in mixed populations and in single cells
Li, G., Liu, Y., Zhang, Y., Fang, R., Kellis, M., Ren, B.
10.1101/470963 — Posted: 2018-11-15
Promoter-intrinsic and local chromatin features determine gene repression in lamina-associated domains
Leemans, C., van der Zwalm, M., Brueckner, L., Comoglio, F., van Schaik, T., Pagie, L., van Arensbergen, J., van Steensel, B.
10.1101/464081 — Posted: 2018-11-06
Satb1 integrates DNA sequence, shape, motif density and torsional stress to differentially bind targets in nucleosome-dense regions.
GHOSH, R. P., SHI, Q., YANG, L., REDDICK, M. P., NIKITINA, T., ZHURKIN, V. B., FORDYCE, P., STASEVICH, T. J., CHANG, H. Y., GREENLEAF, W. J., LIPHARDT, J. T.
10.1101/450262 — Posted: 2018-10-26
The genome-wide, multi-layered architecture of chromosome pairing in early Drosophila embryos
Erceg, J., AlHaj Abed, J., Goloborodko, A., Lajoie, B. R., Fudenberg, G., Abdennur, N., Imakaev, M., McCole, R. B., Nguyen, S. C., Saylor, W., Joyce, E. F., Senaratne, T. N., Hannan, M. A., Nir, G., Dekker, J., Mirny, L. A., Wu, C.-t.
10.1101/443028 — Posted: 2018-10-17
Highly Structured Homolog Pairing Reflects Functional Organization of the Drosophila Genome
AlHaj Abed, J., Erceg, J., Goloborodko, A., Nguyen, S. C., McCole, R. B., Saylor, W., Fudenberg, G., Lajoie, B. R., Dekker, J., Mirny, L. A., Wu, T.
10.1101/443887 — Posted: 2018-10-17
Antigen receptor locus dynamics is orchestrated near the sol-gel phase transition to enforce stepwise VDJ gene rearrangement
Khanna, N., Zhang, J., Dudko, O., Murre, C.
10.1101/441444 — Posted: 2018-10-12
Condensin II inactivation in interphase does not affect chromatin folding or gene expression
Abdennur, N., Schwarzer, W., Pekowska, A., Shaltiel, I. A., Huber, W., Haering, C. H., Mirny, L., Spitz, F.
10.1101/437459 — Posted: 2018-10-07
Physicochemical mechanotransduction alters nuclear shape and mechanics via heterochromatin formation
Stephens, A. D., Liu, P. Z., Kandula, V., Chen, H., Almassalha, L. M., Backman, V., O'Halloran, T., Adam, S. A., Goldman, R. D., Banigan, E. J., Marko, J. F.
10.1101/423442 — Posted: 2018-09-21
Twist-bend coupling and the statistical mechanics of DNA: perturbation theory and beyond
Nomidis, S. K., Skoruppa, E., Carlon, E., Marko, J. F.
10.1101/422683 — Posted: 2018-09-20

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