Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

426 Articles

Multi-color super-resolution imaging to study human coronavirus RNA during cellular infection
Wang, J., Han, M., Roy, A. R., Wang, H., Moeckl, L., Zeng, L., Moerner, W. E., Qi, L. S.
10.1101/2021.06.09.447760 — Posted: 2022-01-13
Macrophage inflammatory and regenerative response periodicity is programmed by cell cycle and chromatin state
Daniel, B., Belk, J. A., Meier, S. L., Chen, A. Y., Sandor, K., Qi, Y., Kitano, H., Wheeler, J. R., Foster, D. S., Januszyk, M. S., Longaker, M. T., Chang, H. Y., Satpathy, A. T.
10.1101/2021.06.24.449850 — Posted: 2021-06-25
Population-based structure modeling reveals key roles of nuclear microenvironment in gene functions
Yildirim, A., Hua, N., Boninsegna, L., Polles, G., Gong, K., Hao, S., Li, W., Zhou, X. J., Alber, F.
10.1101/2021.07.11.451976 — Posted: 2022-02-14
ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR
Sharma, A., Akshay, A., Rogne, M., Eskeland, R.
10.1101/2021.06.21.449316 — Posted: 2021-08-02
SARS-CoV-2 Restructures the Host Chromatin Architecture
Wang, R., Lee, J.-H., Xiong, F., Kim, J., Al Hasani, L., Yuan, X., Shivshankar, P., Krakowiak, J., Qi, C., Wang, Y., Eltzschig, H. K., Li, W.
10.1101/2021.07.20.453146 — Posted: 2021-07-21
Heterochromatin diversity modulates genome compartmentalization and loop extrusion barriers
Spracklin, G., Abdennur, N. A., Imakaev, M., Chowdhury, N., Pradhan, S., Mirny, L., Dekker, J.
10.1101/2021.08.05.455340 — Posted: 2021-08-06
Cell type determination for cardiac differentiation occurs soon after seeding of human induced pluripotent stem cells
Jiang, C. L., Goyal, Y., Jain, N., Wang, Q., Truitt, R. E., Cote, A. J., Emert, B., Mellis, I. A., Kiani, K., Yang, W., Jain, R., Raj, A.
10.1101/2021.08.08.455532 — Posted: 2021-08-08
BCL6-dependent TCF-1+ progenitor cells maintain effector and helper CD4 T cell responses to persistent antigen
Xia, Y., Sandor, K., Pai, J. A., Daniel, B., Raju, S., Wu, R., Hsiung, S., Qi, Y., Yangdon, T., Okamoto, M., Schreiber, R. D., Murphy, K. M., Satpathy, A. T., Egawa, T.
10.1101/2021.08.06.455141 — Posted: 2021-08-09
Biochemically distinct cohesin complexes mediate positioned loops between CTCF sites and dynamic loops within chromatin domains
Liu, Y., Dekker, J.
10.1101/2021.08.24.457555 — Posted: 2021-08-26
Pairs and Pairix: a file format and a tool for efficient storage and retrieval for Hi-C read pairs
Lee, S., Vitzthum, C., Alver, B. H., Park, P. J.
10.1101/2021.08.24.457552 — Posted: 2021-08-26

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