Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

451 Articles

Massively parallel genomic perturbations with multi-target CRISPR reveal new insights on Cas9 activity and DNA damage responses at endogenous sites
Zou, R. S., Marin-Gonzalez, A., Liu, Y., Liu, H. B., Shen, L., Dveirin, R., Luo, J. X. J., Kalhor, R., Ha, T.
10.1101/2022.01.18.476836 — Posted: 2022-01-20
Multi-color super-resolution imaging to study human coronavirus RNA during cellular infection
Wang, J., Han, M., Roy, A. R., Wang, H., Moeckl, L., Zeng, L., Moerner, W. E., Qi, L. S.
10.1101/2021.06.09.447760 — Posted: 2022-01-13
Kinetic principles underlying pioneer function of GAGA transcription factor in live cells
Tang, X., Li, T., Liu, S., Wisniewski, J., Zheng, Q., Lavis, L., Rong, Y., Wu, C.
10.1101/2021.10.21.465351 — Posted: 2022-01-07
Reliance of neuronal gene expression on cohesin scales with chromatin loop length
Calderon, L., Weiss, F. D., Beagan, J. A., Oliveira, M. S., Wang, Y.-F., Carroll, T., Dharmalingam, G., Gong, W., Tossell, K., de Paola, V., Whilding, C., Ungless, M. A., Fisher, A. G., Phillips-Cremins, J. E., Merkenschlager, M.
10.1101/2021.02.24.432639 — Posted: 2022-01-02
Divergent clonal differentiation trajectories of T cell exhaustion
Daniel, B., Yost, K. E., Sandor, K., Xia, Y., Qi, Y., Hiam-Galvez, K. J., Meier, S. L., Belk, J., Giles, J. R., Wherry, E. J., Chang, H., Egawa, T., Satpathy, A.
10.1101/2021.12.16.472900 — Posted: 2021-12-17
Single-fiber nucleosome density shapes the regulatory output of a mammalian chromatin remodeling enzyme
Abdulhay, N. J., Hsieh, L. J., McNally, C. P., Ketavarapu, M., Kasinathan, S., Nanda, A. S., Ostrowski, M. S., Wu, K., Moore, C. M., Goodarzi, H., Narlikar, G. J., Ramani, V.
10.1101/2021.12.10.472156 — Posted: 2021-12-11
Chromatin interaction aware gene regulatory modeling with graph attention networks
Karbalayghareh, A., Sahin, M., Leslie, C. S.
10.1101/2021.03.31.437978 — Posted: 2021-12-10
CRISPR Cas13-based tools to track and manipulate endogenous telomeric repeat-containing RNAs in living cells
Xu, M., Chigumira, T., Chen, Z., Tones, J., Zhao, R., Dahl, K. N., Chenoweth, D. M., Zhang, H.
10.1101/2021.12.03.471109 — Posted: 2021-12-04
Allelic correlation is a marker of tradeoffs between barriers to transmission of expression variability and signal responsiveness in genetic networks
Boe, R. H., Ayyappan, V., Schuh, L., Raj, A.
10.1101/2021.11.26.470134 — Posted: 2021-11-26
Single-Cell Multiomics Defines Tolerogenic Extrathymic Aire-Expressing Populations with Unique Homology to Thymic Epithelium
Wang, J., Lareau, C. A., Bautista, J. L., Gupta, A. R., Sandor, K., Germino, J., Yin, Y., Arvedson, M. P., Reeder, G. C., Cramer, N. T., Xie, F., Ntranos, V., Satpathy, A. T., Anderson, M. S., Gardner, J. M.
10.1101/2021.11.05.467513 — Posted: 2021-11-06

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